Porifericola rhodea: PZB74_19215
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Entry
PZB74_19215 CDS
T09201
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
prho
Porifericola rhodea
Pathway
prho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PZB74_19215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_19215
Enzymes [BR:
prho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PZB74_19215
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PZB74_19215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
DEAD
PhoH
HHH
PIF1
SRP54
nSTAND3
AAA_22
UvrD-helicase
NPHP3_N
AAA_28
AAA
HHH_2
T2SSE
ABC_tran
DUF3140
AAA_24
Thymidylate_kin
UvrD_C
AAA_18
MeaB
Rad17
HHH_3
CbiA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WKN31083
LinkDB
All DBs
Position
4689560..4692043
Genome browser
AA seq
827 aa
AA seq
DB search
MNEQVTSKQSPALEKLSGIVKRVTFHSAETGWSVLKVSSFARPHEEIAVTVHQSKVFAGA
TMDFFGMWVNHPTYGRQFKASRVEERKPATAHALEKYLGSGLIKGVGPKTARKIVKYFGK
DTLDVFEHDIDRLTEVPGIAQRKLSSIQSAWTEHQEIREVMMFLQSHGISTLFAVKIYKT
YGQQAISIVQQNPYRLAHDIFGIGFMSADRVALSLGLAKDSSARVQAGIAYELQNAREEG
HCYLTREQITTQTIALLGLEKEERIAEELKLMEDTDELKTRLLPTDEGEQTVYYAHSLYF
DEAYLAKKSHIMAHEKFTVDEHKVQQWIARYCEHHELTLSDEQQLSVKQVIGRGLCILTG
GPGCGKTTTTKVIVALLKAMGKEVLLAAPTGRAAQRMSEVIGDEAKTIHRLLEWDPMKGG
FKRNEENTLDCDFIIVDESSMLDVHLAASLLRAVPQNSQLLLIGDADQLPSVGAGNVFKD
LIASEKVVCARLTQVFRQAAQSKIIQYAHQINQGKLPDIATPFKNPRLWKEGEDCLFIDS
EEATKEQLRFILKVKKYTERTEDEYSLAAEPLESYEMFKDQLVIPDKFSHVNLDKLLEAN
THTNELKEVLRRVSPWSSLHWGFSASDMIERLYREIIPKYVGPEAEIQILSPMSKGSLGT
HKLNEMVQESVNPESSEKAQIEFGGRIFREGDRVIQRKNNYDLNVFNGDIGKITAIDSSD
MSCLVQFGGGDDEKDVTYDKSQLTELDLAYAITIHKSQGSEFGVVIIPLLTQHYNMLFRN
LIYTGLTRAKKMAVFVGSRRALRRAVQQQNSAQRQTALQWLIQHAEA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaagtaacatcaaaacaaagtccagcactggaaaaactgtctggtattgta
aaaagagtgacctttcatagtgcagagacaggttggtctgtgctgaaggtaagctctttc
gcaaggccgcacgaagagatagccgttacggttcatcagtctaaagtttttgccggagcc
acaatggacttctttggtatgtgggtaaaccatccgacctatggcagacagtttaaagcc
agcagagtagaagaaagaaaaccagctaccgcccatgcactggagaaatatctgggttct
ggactaattaaaggagtcggccccaaaacggcacgtaaaattgttaagtactttggtaaa
gatacgctggatgtatttgaacatgatatagacaggcttaccgaagtgccgggtattgcc
caaagaaaattatcctctatacaatcagcctggacagaacatcaggaaatcagagaggtc
atgatgtttttgcagtcgcacggtattagtaccctcttcgctgttaaaatctacaaaact
tatggtcagcaggccatttccatagttcagcaaaatccttatcgtctggcacatgatatt
tttggcattggttttatgagtgcagatagagttgctctgagcctggggttagcaaaagac
tcttcggcaagagtacaggctggtattgcttacgaactccaaaatgccagagaagaaggc
cattgctaccttactcgtgagcagattactacacaaaccattgctctactaggtctggaa
aaagaagaaagaatagcagaggaacttaagctcatggaagatactgatgagctaaaaacc
agacttctacctacagatgagggggagcaaactgtatactatgctcattccctatatttt
gatgaagcctatctggccaagaagagtcacattatggctcatgagaaatttactgttgac
gaacataaagtacagcagtggatagcccgctattgcgaacatcatgaacttactttaagc
gatgaacaacaactatctgtcaagcaggtaattggcagaggtttatgcatactaaccggc
ggaccgggatgtggtaaaacaacaaccaccaaagtaatagtagcactgctcaaagccatg
ggtaaagaagtgttgctggctgctcctaccgggcgagctgcccagcgtatgagcgaggtg
attggcgacgaagccaaaactattcaccggcttttggaatgggaccctatgaaaggtggc
tttaaacgtaatgaagaaaatactctggattgtgactttataattgtagatgagtcatct
atgttggatgtacatcttgcagcctctctcctcagggcagtacctcaaaactcacagcta
ctcttaattggcgatgccgaccagttgccttcggtgggtgcaggtaatgtgtttaaagac
ctgattgcttcagaaaaagtagtctgtgcccgactcactcaggtgttccggcaggctgct
caatccaaaattatccagtacgctcaccagataaaccagggcaagttaccagatatagcc
actccttttaagaatcccaggctttggaaggaaggagaagattgcctctttattgactct
gaagaagcaactaaagagcagcttcgctttatcctgaaagtaaaaaaatacaccgagcgt
accgaagatgaatattctctggcagctgaaccactggaaagttatgagatgtttaaagat
caattggtcatccctgacaaattctcgcatgtaaatttggataaattacttgaggctaat
acccataccaatgagctcaaagaagtgctgcgcagggtatctccctggtcttctctgcat
tgggggttttctgccagcgatatgatagagcgattgtatcgtgagattatccctaaatat
gtaggtccggaagcagaaatacaaattctcagtcctatgagtaaaggtagcctgggaacc
cacaaacttaatgaaatggtgcaggaatcagttaaccccgaaagttcagaaaaagcacag
atagaatttggagggaggattttcagagaaggtgatcgtgttattcagcgtaagaacaat
tacgaccttaatgtttttaacggagatatagggaagattacagctatagatagctcagat
atgagttgcctggtacagtttggtggcggtgatgatgaaaaagatgttacctatgataaa
tctcagctgacagaactggatttagcttatgcaattactatccataagtcgcagggaagt
gagtttggtgtggtaatcatccctctactgactcagcattacaatatgcttttccgaaac
ctgatctataccggacttacccgtgctaaaaaaatggcggtctttgtaggaagccgcaga
gctctacgtagagcggtacaacagcaaaatagtgctcaaaggcaaaccgctttacaatgg
ctgattcaacatgctgaagcctga
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