Porifericola rhodea: PZB74_22385
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Entry
PZB74_22385 CDS
T09201
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prho
Porifericola rhodea
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_22385
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PZB74_22385
Archaeal homologous recombinant proteins
PZB74_22385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_21
AAA_29
Toprim_Crpt
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WKN31699
LinkDB
All DBs
Position
complement(5438625..5441705)
Genome browser
AA seq
1026 aa
AA seq
DB search
MIPVKLTLRGLYSYRESQTIDFETLTASQLFGIFGAVGGGKSSILEAIMFVLFDRSDRLN
QKDNRYYNMLNLQSNEMEIDFIFRAETNSESTYRFYFRAGRNRNNYEQVVLRDRNYYKGN
SGEWQPIAVKDASELLGMNYDNFMQTVIIPQGKFREFVDQGATQRTQMLKELFNLNQYEL
GGKVKVLSQKNKTDLTEVQARLSEIGGISQEEIENEKEKVAQLEKGRGEKQSKADALEKD
CQAQEALCKLFESIVATEKEQQTLEAQQKQIEQREKQLNDYNRAYTYFKERLQRKVDIGH
EISSLTQKRKVLLEEIEQQKQQLLSAKEELQKRQQDYEQRETDILKCQDLEYVIKIREYQ
LEQEKNQHTLKASQQKVEQLTRTLEESKKLLSEEEESLAEFDKKLRFRATLNDIHHWHVQ
HKRWQQEHTSCEDQQKQYLSHIEKLSTQQKQRLSDFEWLKETTDLEVVKTKIRSRIQEIR
SRQQQEQTILQNLQVKEKLSAYANNLEEGKACPLCGSEHHPQIVHTTSVHQELEQQQSLM
QKLQEEENQIRQLADEVATMDSDMRTTQALLEKTKSELEKVKQNIKAHHQQFAWEDFASY
NDAQIRGFISKLDKLGKKAEVLRKVVQDKKKNIPLQEQSLKVAQEVLQQQQQNEHALQTS
INNLLGLLKVYEYEGWKNHALSELKESLHRGKRKVEEADEQYKKATKHYNECEKNLHGSQ
SREETEKERLEQEKQKLAKVEEELEALCHQKNFESLEEVRNLLSLKLNVEEEQKAIQQYH
TQINSIKDQLSKLKREAEGKHYDKQKHEAILREWQQQKAELQKCQERIAVAREQLKQMEE
RLQNSRQLQEKLEKLRVREDNLKELASLFKGSGFVRYVSSVYLDNLCRTANERFMKLTRN
SLSLELNAEGEFIVRDFLNNGKTRLLKTLSGGQTFQAALCLALALAENVKTLNQAEQSFF
FLDEGFGSLDKESLRLVFDTLKSLRKEQRIVGIISHVEELQQEIDVYLKVQNDKERGSLI
SCSWKS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtaaaacttaccctcagaggcttatactcctaccgcgagtctcaaactata
gattttgaaacattaacggcctctcagctatttggtatttttggggctgtgggaggagga
aaatcttccatactggaagccattatgtttgtgctttttgatcgtagtgatcgcctcaat
caaaaagacaatcgctattataatatgctcaacttacaaagtaatgagatggaaattgac
ttcatctttcgggcagaaaccaatagcgaatctacctatagattttattttagagcggga
cgaaaccgtaacaactatgaacaggtagtattacgagaccgtaattactacaaaggtaat
agtggagagtggcagcctatagctgttaaagatgcctctgaattattaggcatgaattac
gacaacttcatgcagacggttattattcctcagggcaaattcagagagtttgtggaccag
ggagctacccaacggacgcagatgcttaaagagttgttcaatctcaatcagtatgagttg
ggcggaaaggtaaaggtactgtcccagaaaaataaaactgaccttaccgaagtacaggcg
cgcctttctgaaattggtggtataagccaggaagagatagaaaatgagaaagaaaaggta
gcacagctagagaagggtaggggagaaaaacagagcaaggcagatgccctggaaaaagat
tgtcaggcgcaggaagctctgtgcaagctgtttgaaagtatagttgctactgaaaaagag
caacagacccttgaagcacagcagaagcagatagaacaaagagagaaacagctgaatgat
tataatcgggcttatacttactttaaagaaagacttcaacgaaaggtagatataggtcat
gaaatcagtagtttaactcaaaaacgtaaagtattacttgaagagattgagcaacagaag
cagcaactcctgtctgccaaagaagaattacaaaaaagacagcaggattacgagcaaaga
gaaacagatatcctcaaatgtcaggatctggagtatgtaattaagatcagagagtaccag
cttgagcaggagaagaaccagcataccctaaaggcgagccaacaaaaagtagagcagtta
acacgaacgctggaagaaagcaaaaagctgctcagtgaagaggaagagagcttggctgag
ttcgacaaaaagctacgcttccgcgctaccctcaacgatattcatcactggcatgtacag
cataaaagatggcagcaggaacacacatcctgcgaagatcagcagaagcagtacctctca
catatagaaaagctgagcactcagcagaagcaacgcctttctgattttgaatggctaaaa
gagactacagatctggaagtggttaaaacaaaaatacgtagtcgcattcaggaaatacga
agcaggcaacagcaggaacaaaccatattgcaaaatttgcaggtaaaagaaaagttatct
gcctacgcgaataatctagaggaaggcaaagcctgtccgctttgcggctctgagcatcac
ccacagattgtacacactacttcggtgcatcaggaactggagcagcagcaatcactcatg
caaaagcttcaggaagaagaaaaccaaatacgacagttggcagatgaagtagcaacaatg
gatagcgatatgcgtacgactcaggcgctgttagaaaaaactaaatctgaactggaaaaa
gttaagcaaaatataaaagcgcatcaccagcaatttgcgtgggaagattttgcctcctac
aatgacgcgcagatccgcggctttatctctaagctggataaattaggaaaaaaggccgaa
gtccttagaaaagttgtccaggacaaaaagaaaaatatacctctacaggagcaaagtctt
aaagttgcgcaggaagtattacaacaacagcagcaaaacgagcatgctctgcaaaccagt
attaacaatttgcttggtctactcaaagtctatgaatatgaaggttggaaaaatcatgcg
ctttctgagttgaaagagagtcttcaccgggggaaacgcaaggtagaagaagcggacgag
cagtataaaaaagccacgaagcattataatgagtgtgagaaaaatctgcatggcagccaa
agcagagaagaaactgagaaagaacgtttagaacaggaaaagcaaaagttggcaaaagta
gaagaagaactggaagctctatgccatcaaaaaaactttgaaagtctggaagaggtgcgg
aatttactttcgctaaagctgaatgtagaagaagaacagaaggcaatacagcaatatcac
actcaaataaacagcattaaagaccaacttagcaaacttaaacgagaagcagaaggaaaa
cactatgataaacaaaagcatgaagctatcttgcgggaatggcagcagcagaaggctgaa
ctgcagaaatgtcaggagaggattgcagtagctcgtgagcagcttaagcaaatggaggag
cgcctgcaaaatagcaggcaactacaggaaaagctggaaaaactgagggtaagagaagat
aatcttaaagaactggccagtctatttaaaggtagtggctttgtcaggtacgtttcttct
gtttatctggacaatctttgtcgtacggccaatgagcgttttatgaaactgacccgaaac
agcctgagcctggagctaaatgcagagggtgagtttatagtcagagattttctgaataac
ggaaaaactcgcctgcttaagactctctctggaggacaaacttttcaggcagcattatgt
ctggctttggcactggcagaaaatgtaaaaacgctcaaccaggccgaacagagcttcttc
tttctggacgaaggctttggttctctggataaagagtctcttcgcctggtatttgacacc
ctgaagtcgctgcgtaaggagcagagaattgtaggtattatatctcacgtggaagagctg
cagcaggaaatagacgtctatcttaaagtacagaatgataaagagcgtggtagcctgatc
agctgtagctggaagtcataa
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