Pseudomonas rhizophila: CRX69_00390
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Entry
CRX69_00390 CDS
T09779
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz00300
Lysine biosynthesis
prhz00470
D-Amino acid metabolism
prhz01100
Metabolic pathways
prhz01110
Biosynthesis of secondary metabolites
prhz01120
Microbial metabolism in diverse environments
prhz01230
Biosynthesis of amino acids
Module
prhz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CRX69_00390
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CRX69_00390
Enzymes [BR:
prhz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CRX69_00390
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
AVU73716
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Position
complement(90595..91425)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRNDGQIGVNM
GAPRLAPKDIPFEAPAQALSYQLEVDGTTVELAAVSMGNPHAVLRVSDINSAPVHELGPK
IENHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcatgccaaacaatggggcgaccggcacacc
ggtatcggtttcgaccagttgctgatcgtcgaggcgcccaacaacccggacgtggacttc
cgttaccggatcttcaacgccgatggttcggaagtcgagcagtgcggcaacggcgcccgc
tgcttcgcccgattcgtgctggacaagcgcctgaccgccaaacggcagattcgcgtcgag
actaaaagcggcatcatcgaactggatgtgcgcaacgacggccagatcggcgtcaacatg
ggcgccccgcgcctggcaccgaaggacattccgttcgaagcgccggcccaggccttgagc
tatcagttggaggtcgacggcaccacggtggaactggcggcagtatccatgggcaacccc
catgccgtcttgcgagtcagcgatatcaacagcgcgccagtgcatgagctggggccgaag
atcgaaaatcatccgcgcttccccgcgcgggtgaatgtcggtttcctgcaggtcatcgac
cgccaccgtgcgcaattgcgcgtctgggaacgcggtgccggggaaacccaggcgtgcggc
accggcgcctgcgcggcggcagtcgccgcgatcagtcagggatggatggattcgccttta
ctgatcgacctgcccggtggacgcttgtccatcgaatgggcaggccccggccaaccggtg
ctgatgaccggcccggcagtacgcgtatacgaaggacaagttcgtctttga
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