Pseudomonas rhizophila: CRX69_00610
Help
Entry
CRX69_00610 CDS
T09779
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRX69_00610 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prhz03021
]
CRX69_00610 (rho)
03019 Messenger RNA biogenesis [BR:
prhz03019
]
CRX69_00610 (rho)
Transcription machinery [BR:
prhz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CRX69_00610 (rho)
Messenger RNA biogenesis [BR:
prhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CRX69_00610 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
AVU73759
UniProt:
A0ABN5JN43
LinkDB
All DBs
Position
131725..132984
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLELAEQMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
FDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRKIAEKRVFPAINI
NRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLVDKLKQTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagccgattaccgaactgctcgaattggccgaacag
atgggcatagaaaatatggcccgttcgcgcaagcaggacgtgattttctccctgctcaaa
aagcacgcgaaaagcggcgaggaaatctccggtgatggcgtgctggagattctccaggac
ggcttcggctttctccgctccgcagacgcttcctatcttgccggcccagacgatatctac
gtctcgccgagccagatccgtcgtttcaacttgcgcaccggtgacaccatcgttggcaag
atccgccctccgaaggaaggcgagcgttacttcgcgctgctcaaggtcgacacgatcaac
ttcgatcgtccggaaaacgcgaagaacaagattctcttcgagaacctgaccccgctgttc
ccgaccgtgcgcatgaagatggaggccggtaacggttccaccgaagacctcaccggccgg
gtcatcgacctgtgcgcacctatcggcaagggccagcgcggtctgatcgtggcgccgccg
aaagcgggcaagacgatcatgctgcagaacatcgcggccaatatcgctcgtaacaaccct
gaagttcatctgatcgtgctgctgatcgacgagcgtccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggttgcctcgacgttcgacgagccgccgacccgccacgtg
caggttgccgaaatggtgatcgagaaggccaagcgcctggtcgaacacaagaaagacgtg
gtgatcctgttggattccatcacccgtctggcccgtgcctacaacaccgtgatcccgagc
tccggcaaggtgctgaccggtggtgtcgatgcccacgccctggagaaaccgaaacgtttc
ttcggcgccgcgcgcaacatcgaagaaggcggctcgctgaccatcatcgccaccgcgctg
gttgaaaccggctcgaagatggacgaagtgatctacgaggaattcaaaggcaccggtaac
atggaactgcctctggatcgcaagatcgctgaaaagcgcgtcttcccggccatcaacatc
aaccgttccggcacccgccgcgaagagttgctgaccgccgacgacgagctgcagcgtatg
tggatcctgcgcaagctcctgcatcctatggatgaagtcgctgccatcgagtttttggtc
gacaagttgaagcagaccaagaccaacgatgagttcttcctgtcgatgaaacgcaagtaa
DBGET
integrated database retrieval system
