Pseudomonas rhizophila: CRX69_03290
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Entry
CRX69_03290 CDS
T09779
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CRX69_03290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_03290
Enzymes [BR:
prhz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CRX69_03290
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CRX69_03290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4807
Motif
Other DBs
NCBI-ProteinID:
AVU78668
UniProt:
A0ABN5K4I0
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All DBs
Position
complement(726987..728366)
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AA seq
459 aa
AA seq
DB search
MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQISLTLIPT
AVQGREATAQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDAGDLVRRVESLHRRLVMRMRDRLMRDQLR
LEGLTRRLRHPGERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAAQHPGRHL
ALLRQRLDSLAARLPRAMREGLKARRLQLQNQMQTLHIVSPLATLGRGYSILLDERGQAI
RNAAQTQTGQRLTARLGEGELLVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagatccctttgcccgactgggcctggaccgcgaggtcctgactgtcagccag
ctcaacggccgtgcgcgggtgctgcttgaagacgtgttcagcaacatctgggtcgagggc
gaaatttccaaccttgcccgccctgcctccggccatgtgtatttcaccctcaaggacagc
ggcgcccaggtgcgttgcgcactcttccggcaaaatgccgcgcgggtgcgtcaagccctc
aaagacggactggcggtgaaagtacgcggcaaggtctcactgttcgagggccgcggcgac
tatcagctgattctcgacaccgtggaaccggccggcgatggcgccctgcgcctggccttc
gatgcgctcaaggaaaagctcagcgccgaaggcctgttcagcgccgagcgcaaggtgccg
ctgccggcccatccgcaacgcatcggcatcatcagttcgcccaccggcgcggtgatccgc
gacatcatcagcgtgttccgccgccgtgcgccgcagatttccctgacgctgatccccacc
gccgtacagggccgcgaagccaccgcgcaaatcgtccgtgcgctgaaactggcggatgcc
cgggggttcgatgcgctgatcctggcccgaggcggcggctcgctggaagacttgtggtgc
ttcaacgaagaagccgtggcccgggcggtggacgcctgcgtcacgccgatcgtcagcgcc
gtcggccatgaaaccgacgtatccatcagcgatttcgtcgctgacgtgcgcgccccgacc
ccgtccgccgctgccgaactgctggcccccgatgccggcgacctggtgcgccgggtcgaa
agcctgcaccggcggctggtgatgcgcatgcgcgatcgcctgatgcgcgatcaactgcgc
ctcgaagggctgacccgacgcctgcgccaccccggtgagcgcctacgccagcaagcccag
cgcctcgacgacctggacatgcgcatgcgccgggctttcgagcgcagcctcaatacccgc
cgcgaacgcctgatccgcctggaaacccgcctggccgcgcaacatccggggcggcacctg
gcactgctgcgccaacgcctggacagcctcgccgcgcgcctgccccgggccatgcgcgag
ggcctgaaggcgcgacgcctgcaactgcaaaaccagatgcagacgctgcacatcgtcagc
cccctggcgaccctcggccgcggctacagtattttgctcgacgaacgcggccaggcgatc
cgcaacgccgcgcagacccaaaccggccagcgcctgaccgcgcggctcggtgaaggcgaa
ctgctggtgcgggtcgaagacaatcacctgacgccggtcaccctttctctattggattga
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