Pseudomonas rhizophila: CRX69_03800
Help
Entry
CRX69_03800 CDS
T09779
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03030
DNA replication
prhz03430
Mismatch repair
prhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRX69_03800
03430 Mismatch repair
CRX69_03800
03440 Homologous recombination
CRX69_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prhz03032
]
CRX69_03800
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_03800
Enzymes [BR:
prhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRX69_03800
DNA replication proteins [BR:
prhz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CRX69_03800
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CRX69_03800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AVU74358
UniProt:
A0ABM6UA99
LinkDB
All DBs
Position
837431..840952
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDAPLSRISLLVMNAVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEANEGLIMLSAAKEGEIGLALLSGNPEEAEVLARDWMAVFPDRFYIEVQRTNRPNDEEH
LHAAVALADKIGAPLVATNDVRFIKQEDFEAHETRVCIGEGRALDDPRRPKNYSDQQYLK
SAEEMAELFSDLPEALENTVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
DERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYDGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFQDEP
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGELFKRHRGACPITMEYVRPDAKAV
LQFGEGWRIDPADALIQALRDQFGKDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgagtactccctggtcgatggcctg
gtgcggatcaagccactggtcaagactctggtgggcatgaacatgcctgctgtggcggtc
accgaccagaacaacatgtgttcgctggtcaagttctacaaaaatgccatgggcgccggg
atcaagccgatctgcggggccgacctgtggctgtcgaacaaagacccggacgcgccgctg
agccgcatcagcctgctggtgatgaacgccgtgggttaccgcaacctcaccgagttgatc
tcccgcggttttatcgatggccagcgcaacggctcgatcatcatcgagcgcgaatgggta
gctgaggccaatgaaggtttgatcatgctgtcggcggccaaggaaggtgaaatcggcctg
gccctgctcagtggcaatccagaagaagccgaagtgctggcccgcgattggatggcggtg
ttcccggaccgcttctacattgaagtgcaacgcaccaatcgccccaacgacgaagaacac
ctgcatgccgccgtggccctggccgacaagatcggcgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggaagacttcgaggctcacgaaacccgcgtctgcatcggtgaa
ggccgggcgctcgatgatccgcgtcgtccgaaaaactacagcgatcagcaatacctcaaa
agcgccgaggaaatggccgagttgttcagcgacctgcccgaggcgctggaaaacacggtc
gagattgccaagcgctgcaacatcgaagtgaagctgggcaagcacttcctgcccaacttc
ccgatccccgatggcatgaccatcgacgagtatttccgcaaggtgtccttcgatggcctg
gatgagcgcctcagcgttctcttgcccaaggacaccaccgaagattacgaggccaagcgc
caggtctatgtcgaccggttgaatttcgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagagcaacggcgtgccggtg
gggccaggccgggggtcgggtgcaggctccctggtggcttacgtgcagaagatcaccgac
ctcgacccgctggaatatgacctgctgttcgaacgtttcctcaacccggaacgggtgtcc
atgcccgacttcgacgtcgacttctgcatggacggtcgcgaccgggtgattgattacgtg
gccgagaaatacggccgcaacgcggtgagccagatcatcaccttcggttccatggccgcc
aaggctgtggtgcgtgacgtggcgcgggtgcagggcaagtcctacggtttggcggatcgt
ctgtcgaagatgatcccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgggacttcatcaaggtcgatgaagaagccgcggaaatctgggagatggcc
cgcaagcttgagggcgtggtgcgtaacgtcggcaagcacgccgggggcgtggtgatcgcg
ccgaccaagctgactgacttctcgccgatctattgcgatgaagagggcgacggcctggtg
acccagttcgacaaggatgacgtcgaggcggcgggcctggtgaagttcgacttccttggc
ctgcggaccctgacgatcatcgactgggcgctgaaaaccatcaaccgtgaccgggccaag
gtcggcgaagagccgctggacatcgccttcatcccgctggatgacaagccgacctacagc
ctgctgcaaaaagccgaaaccacggcagtgttccagcttgaatcccggggtatgaaggag
ctgatcaaaaagctcaagcccgactgcctcgaagacctgatcgcactggtggccctgttc
cgtccgggcccgctgcaatcgggcatggtggatgactttatcaaccgtaagcacgggcgc
gccgagctggcgtacccgcacccggattatcagtacgacggcctcaagccggtcctggca
ccgacctacggcatcatcctgtaccaggaacaggtgatgcagattgcccaggtaatggcc
ggttacaccctcggcggcgcggacatgctgcgtcgggcgatgggtaagaaaaagcccgag
gaaatggccaagcagcgcggcggtttcatcgagggttgtgcgaacaacggcattgatgcg
gacctggccggtaacatcttcgacctggtggaaaaattcgccggttacggcttcaacaaa
tcccactcggccgcctatggtctggtgtcgtaccagaccgcgtggctgaaggcccactac
ccggcgccattcatggccgcggtactgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcggaccatgaagttgcgcctcgacgcaccggacgtgaacgct
tcggagttcaagttcacggtgaacgacgaaggccgcatcatttatggactgggggcgatc
aagggtgtgggtgaaggaccggtggaagccatcaccgaagcccgtcaggacggaccgttc
aaggacctgttcgatttttgcgcccgggtcgatctcaaacgcatcaacaaacgtaccctc
gacggtttgatccgcagcggtgcattggaccgtctgggcccgtacttccaggatgaaccc
aaggcctaccaggccaatatcgaccgcaaccgcgcggtgctgctggcggccatggaagaa
gcgatcaaggccgccgagcaaaccgcccggacccatgacagtggtcacgccgacctgttt
ggcgggttgtttgtcgaggaagatgccgatgtctacggcaatcaccgcaaggccaaggag
ctgacgctcaaggagcgtctcaagggtgagaaagacaccttgggcctgtacctcacgggt
cacccgatcgacgagtacgaaggcgagatccgccggttcgcccgccagcgcatcattgat
ctgaagccggcgcgtgacacgcagaccgtcgccggtatgatcatcgccctgcgggtaatg
aaaaacaaaaagggcgacaagatgggcttcatcaccctcgacgaccgctccgggcgcatc
gaggcgtcgttgtttgccgatgcgttccattcggcccagtcgctgttgcagactgacgcg
atggttgtggtggaaggcgaagtcagcaacgacgatttttccggtggcctgcggctgcgg
gtcaaacgggtgatgagcatggaagatgcccggaccaacctggccgagagcctgcgcctg
aaattgcagacccaggatctcaagggcgatcagctacgctggctgggggaattgttcaag
cgccatcgcggtgcttgcccgattaccatggagtacgtgcgccccgacgccaaggctgtg
ctgcagttcggcgaaggctggcggatcgatccggcggatgcgttgattcaagccttgcgt
gaccagttcggtaaagacaacgtcttcctccaataccgttga
DBGET
integrated database retrieval system
