Pseudomonas rhizophila: CRX69_04160
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Entry
CRX69_04160 CDS
T09779
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
prhz
Pseudomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prhz03009
]
CRX69_04160
Enzymes [BR:
prhz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CRX69_04160
Ribosome biogenesis [BR:
prhz03009
]
Prokaryotic type
ribosomal protein modification factors
CRX69_04160
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Matrix_Paramyxo_N
YajR_YAM
Moricin
Motif
Other DBs
NCBI-ProteinID:
AVU74426
UniProt:
A0ABN5JMN2
LinkDB
All DBs
Position
complement(903472..904812)
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AA seq
446 aa
AA seq
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MSTTTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHDVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWRQICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDEVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQIG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactaccgcgccggccaaccccaaggttggcttcgtatccctgggttgcccg
aaggctctggtcgactccgagcgcatcctgacccagctgcgcatggaaggttatgacgtc
gtatccacgtaccaggacgccgacgtggtagtggtcaacacctgcggcttcatcgattcg
gccaaggccgagtccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtggaagaaggcaatattcgcgacgtgcaccccagcgtgctg
gccgtgaccggtccgcagcagtacgagcaggtcgtcaatgccgtgcacgacgtagtgccg
ccccgccaggaccacaacccgctgatcgacttggtgccgccgcaaggcatcaagctgacc
ccgcgccactacgcttacctgaagatttccgaaggctgcaaccacagttgcagcttctgc
atcatcccctcgatgcgcggcaaactggtgagccgcccggtgggtgatgtgctcgacgag
gcccagcgcctggtcaaggccggcgtcaaggagctgctggtgatctcccaggacaccagc
gcttatggcgtcgacgtgaaataccgcactggcttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcaccctcggcgtgtgggtccgcctgcattac
gtctacccgtatccgcatgtcgatgaactgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtcctcaaggccatgaagcgc
ccggctttcgaagacaagaccctggcccgcatcaagaactggcgccagatctgcccggac
ctgatcatccgctcgaccttcatcgtcggcttccctggcgaaaccgaggaagacttccag
tacctgctggattggctgaccgaagcccagctcgaccgcgtcggttgcttccagtattcg
cccgtcgaaggcgcaccggccaacgacctggacctggatgtggtgccggacgaggtcaag
caggatcgttgggagcgtttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtactggtggatgaagtggatgaacaaggcgccgtg
ggccgctgcttcttcgacgccccggaaatcgatggcaacgtattcatcgacaacggcagc
aatctcaagccgggcgacaaggtctggtgcaaggtgaccgacgctgacgaatacgatctg
tgggctgaacagatcggttga
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