Pseudomonas rhizophila: CRX69_05090
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Entry
CRX69_05090 CDS
T09779
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
prhz
Pseudomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prhz03000
]
CRX69_05090
Transcription factors [BR:
prhz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CRX69_05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
Peripla_BP_1
HTH_23
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AVU74606
LinkDB
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Position
1107089..1108273
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AA seq
394 aa
AA seq
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MKTVPPVHRIALLFNGSKIYDRGIISGIGNYLSSTRASWDLFLEEDFLCRLKGIERWQGD
GIIADFDDPLIGEALSGIGLPVVAVGGSYQDERAYPKGIPYVATDNEALMKLAYEHLIEA
GLTRFACFSLPQAQANRWAQERENAFRRLLQRDGLHAEVYRGMGTSAPLWDSAVEQQIAW
LQSLPKPIGIIAVSDARARQLLQACLTAGIAVPEQVALIGIDNDPLTRTLTRVPLSSVIQ
GTETMGRTAARLLHQMLHGMPSTGTQVLIPPDAINVQASSLHQPLGNPYVMQALLFIRQY
ACQGIKTAQVAAYVGVSRSSLEAHFRKARGCSVHDEILRFKLAAAAQGLENTDSAIADIA
QNCGFKSAQYLHTVFRREFGCTPREYQQGGGTGH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtcccgcccgttcaccgcattgcgttgttgttcaacggcagcaagatctac
gaccgaggcatcatcagcggcatcggcaactacctgagcagcacccgcgcgtcctgggac
ctgttccttgaagaagattttctctgtcggttgaaaggcatcgaacgctggcagggcgac
gggatcattgccgacttcgatgacccgctgatcggcgaagcgctgagcgggatcggcttg
ccggtggtggcggtgggcggctcttaccaggatgagcgcgcttatccgaagggcattccc
tatgtcgccaccgacaatgaggccttgatgaagctggcgtacgagcacctgatcgaggcc
gggttgacgcgctttgcctgcttcagcctgccgcaagcacaagccaatcgctgggcccag
gaacgggaaaacgcctttcgccggctgctgcaacgcgatggtctgcacgccgaggtctat
cgcggcatgggcaccagcgcgccgctctgggacagcgccgtcgaacaacagatcgcctgg
ctgcaaagcctgcccaaacccatcggtatcatcgccgtcagtgacgcccgtgcccggcaa
ctgctgcaggcctgcctgaccgccggaatcgccgtgccggagcaggtggcactgatcggc
atcgacaacgaccccctgacccgcaccctgacgcgggtgccgctgagttcggtgatccag
ggcaccgaaaccatgggccggaccgccgcgcgcctgctccatcagatgctgcacggcatg
ccgtccacgggcacgcaggtgctgatacctccggatgcgatcaacgtccaggcctcgagt
ctgcaccaaccgttaggcaacccttacgtcatgcaagcgctgctgttcattcgccaatat
gcctgccagggcatcaagaccgctcaggtggcggcctatgtgggcgtgtcgcgctcctcc
ctggaagcgcactttcgcaaggcgcggggctgcagcgtgcacgacgagatcctgcgcttc
aaactggcagcggccgcccagggcttggaaaacaccgactcggcgattgccgacatcgcc
cagaactgcggcttcaaatcggcgcagtacctgcacacggtgtttcgtcgagagtttggc
tgtacgccccgcgaatatcagcaggggggcggcacaggccactga
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