Pseudomonas rhizophila: CRX69_05355
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Entry
CRX69_05355 CDS
T09779
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
prhz
Pseudomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prhz03000
]
CRX69_05355
Transcription factors [BR:
prhz03000
]
Prokaryotic type
Helix-turn-helix
Other families
CRX69_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_50
AAA_5
HTH_23
PAS_4
AAA_2
AAA
HTH_30
HVO_A0261_N
HTH_29
NACHT
AAA_16
HTH_20
HTH_28
HTH_7
HTH_17
HTH_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVU74657
UniProt:
A0ABN5JNR9
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All DBs
Position
complement(1177693..1179573)
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AA seq
626 aa
AA seq
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MLSAHSRAHVDCVSRVLKNAAQLPQLPVPDLILDSWRRSMEQHHLDPGSLQGPRILSQDV
LKQCRERSELFLNIASEEVARLHGRVRDADYCVLLTDAQGQTIDYRVETTIRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTAKAPVTVHKRDHFRAAFIGLTCSAAPVFDPQGQLLGVLD
VSAVRSPDDRRSQHLIRQMVVQSAREIEQAFFMSSAQGYWVLRAHRNAGYVDSQPDLLFA
WDDDGCLQALNPAARQYLLQHYGQLPQHISQVFDQQLLHRARDERLYPLSSPGIESPLHG
RLSAPRQRANPRPRVAMAPVELDPRLADSLRLAVRVKDRNLPVLIQGETGSGKEVFARQL
HQASQRRDRPFVALNCAAIPESLIESELFGYVAGAFTGASAKGMQGLLQQADGGTLFLDE
IGDMPLALQTRLLRVLAEGEVAPLGASRRRAVDIQVICATHRDLETLVAAGGFREDLYFR
LGGARFQLPPLRERSDRLALINRILEEESAQCGGMAQLSGAALECLLGYHWPGNIRQLRH
VLRYACAVSEASVIQLSHLPESLHCTQAPVDAPQPSASPERQMLLDALVRHRWKPTAAAR
ALGISRATLYRRVHLHGIEMPGRSPA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgctcactcccgggcgcatgtggattgcgtcagccgcgtactgaaaaacgcg
gcgcaactgccacagctgcccgtcccggacctgatcctcgactcctggcgtcgctccatg
gagcaacatcatctggaccccggttcgctgcagggcccgcgcatcctgtcccaggacgtg
ctcaagcaatgccgcgagcgctcggaactgttccttaatatcgccagcgaagaagtcgcc
cggctgcatggtcgggtgcgggatgccgactactgcgtgctgctcaccgatgcccagggc
cagaccatcgattaccgggtggaaaccaccattcgcaatgactgccgcaaggccgggctg
tacttgggcacctgctggtcggagggggaagaaggcacctgcggcgtggcggcggtgctc
acggccaaagccccggtgacggtgcacaagcgcgatcatttccgggcggcgttcatcggc
ctgacctgctccgccgcgccggttttcgacccgcaagggcagttgctcggggttctggat
gtctcggcggtgcgttcaccggatgatcgacgctcacagcacctgatccggcagatggtg
gtccagagcgctcgggaaatcgaacaggcgtttttcatgagcagcgcccagggctactgg
gtgctgcgggcccatcgcaacgccggctacgtcgacagccagccggacttgctgttcgcc
tgggacgacgacggttgcctgcaagccctgaaccccgcagcccgccagtacctgctgcaa
cactacggccaactgccgcagcacatcagccaggtgttcgaccagcaactgctgcaccgt
gcccgcgacgagcgtctgtatccgctgtccagccccggcatcgagtcgcctttgcatggt
cgtctgagtgcgccgcgacagcgggccaatccgcgcccccgggttgccatggccccggtg
gagctggatcctcgattggccgacagcctgcgtctggcggtacgggtcaaggatcgcaac
ttgccggtgctgatccagggcgaaaccggctccggcaaggaggtatttgcccgccaactg
catcaggccagccagcgtcgtgaccggccgttcgtggcattgaactgcgcggcgattccc
gaaagcctgatcgaaagcgagttgttcggctacgttgccggggccttcaccggggcctcg
gccaaaggtatgcagggcctgctgcaacaagccgatggcggcacactgtttctggatgaa
atcggtgacatgccgctggctttgcaaacgcgcctgctaagagtattggccgaaggtgaa
gtggcgccactgggagcgtcacggcgcagggccgtggacattcaggtgatctgcgccacc
caccgcgacctggaaacattggttgccgccggcgggtttcgcgaggatctgtactttcgc
ctcggcggcgcccgcttccaactgccgccgctgcgtgagcgcagtgatcggctggcgttg
atcaaccgcatccttgaggaggaatcggcgcagtgcggggggatggcgcaattgagcggc
gcagccctggaatgcctgcttggttatcactggccgggcaatatccgtcagttgcgtcat
gtgctgcgctacgcctgcgcggtgagcgaggcgagtgtgatccagctcagtcacctgccc
gagtcattgcactgcacacaagcgcctgtggacgcaccacaacccagcgccagcccggag
cgtcagatgctgctcgatgcgctggtgcggcatcgctggaagcccaccgccgctgcacgg
gcgctgggcatttcccgagcgaccctgtatcgaagggttcacctgcatggcatcgaaatg
cccggcagaagcccggcgtga
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