Pseudomonas rhizophila: CRX69_05810
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Entry
CRX69_05810 CDS
T09779
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03030
DNA replication
prhz03430
Mismatch repair
prhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRX69_05810
03430 Mismatch repair
CRX69_05810
03440 Homologous recombination
CRX69_05810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prhz03032
]
CRX69_05810
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_05810
Enzymes [BR:
prhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRX69_05810
DNA replication proteins [BR:
prhz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CRX69_05810
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CRX69_05810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AVU74742
UniProt:
A0ABN5JQX6
LinkDB
All DBs
Position
complement(1276922..1277632)
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AA seq
236 aa
AA seq
DB search
MNNPKGQETLDWAARFKRLEQQARHPLLQRFYQQGVIDAGTALEQVELLAMDLETTGLNA
RTDSIVSIGLLPFTLRRIRCGEALYWVIKPSQLSHESVTFHHITHSDIRHAPRLPDVMEK
VLEAMAGKIMVVHYRAIERNFLDQALRNHLGEGLQFPVIDTMQLEARQVRGQRRWLDRLL
RRPPESIRLADSRLRYHLPPYHAHHALTDALATAELLQAQIATHYSPSVPIGQLWD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatccgaaggggcaagaaacgctggattgggcggcacgtttcaaacgtctggaa
cagcaagcccggcacccgctgctgcaacgcttctaccaacagggtgtcatcgacgccggg
actgcgctggagcaggtggaactgctggccatggaccttgaaaccaccggcctgaacgcg
cgcactgacagtatcgtcagcatcggcctgctgccgttcaccctcaggcgcatacgctgc
ggtgaagccctgtactgggtgatcaagccctcgcagctcagtcatgagtcggtgacgttt
caccacatcacgcactccgacatccgtcatgctccccgattgccggacgtcatggagaaa
gtgctggaagccatggcggggaagatcatggtggtgcattaccgggccatcgaacgcaac
ttcctggatcaggcgttacgcaatcaccttggggagggcctgcaatttccggtgattgac
acgatgcagctggaagcgcggcaggtgcgcggtcagcggcgttggctggaccggctgtta
cgccgtccacccgagtccatccggttagcggacagtcgcttgcgctaccacctgccgccc
tatcacgcccatcatgccttgaccgatgccctggcgacggccgagctgttgcaagcgcaa
atagccactcactacagcccgtccgtccctatcggccagctgtgggattaa
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