Pseudomonas rhizophila: CRX69_07095
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Entry
CRX69_07095 CDS
T09779
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRX69_07095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_07095
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRX69_07095
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CRX69_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
AAA_23
RsgA_GTPase
AAA_33
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
HUTI_composite_bact
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AVU74979
LinkDB
All DBs
Position
complement(1537078..1539912)
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC
PDHDIPLEAQTVSQMVDLVLAQPEGSKLMLLAPVIRERKGEHLMVFEELRAQGFVRARVN
GKLCELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYKFSLDKPFNELPADQQKFILHGSGSQSVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDATDYFGGLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAQGTAAEVMAHPDSLTGKYLSGRVKIKVP
AKRTPRNKKLSLSLKGARGNNLRNVDLDIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKNIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIAVGTPEEVAEMKQSYTGYYLKPLLERDRD
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagatcctgattcgtggggcccgtacccacaacctgaagaacatcgacctgacc
ctgccacgggacaagctgatcgtcatcaccggcctgtccggatccggcaaatcatccctg
gccttcgacaccctgtacgctgaaggccagcggcgctatgtcgaatcgctgtcggcctac
gcccggcagttcctgtcgatgatggaaaaacccgacgtcgacaccatcgaaggcctgtcg
ccggcgatttccatcgaacagaaatcgacttcccacaacccacgctcaaccgtcggcacc
atcaccgagatctacgattacctgcgtttgctgtatgcgcgggtcggtattccgcggtgt
cccgaccacgacatcccgctggaagcccagaccgtcagccagatggtcgacctggtgctg
gcccagcccgaaggcagcaagttgatgctgctggcgccggtcatccgcgagcgaaagggc
gagcacctgatggtcttcgaagaactgcgcgcccaaggcttcgttcgggcacgggtcaac
ggcaagctgtgcgagctggacgaactgccgaagctggataaacagaaaaagcattcgatc
gatgtggtggtcgaccgcttcaaggtccgggccgacctgcaacagcgtctggccgaatcc
ttcgagaccgcgctgaagctggccgacggcatcgccctggtagcgccgatggacgacgag
cccggcgaggaaatcatcttctcggcgcgcttcgcctgcccgatctgcggccacgccatc
agcgagctggaacccaagctgttctccttcaacaacccggccggcgcgtgcccgacctgc
gatggcctgggggtcaagcagttcttcgacaccaagcgcctggtcaatggcgaactgacc
ctggccgagggcgcgattcgcggctgggaccggcgtaacgtctactacttccagatgctc
gggtcgctggcggcccactacaagttcagcctggacaaacccttcaatgaactgcccgcc
gaccagcagaaattcatcctgcacggcagcggctcacaaagtgtcgacttcaaatacctg
aacgaccgtggcgatatcgtcaaacgctcccacccgttcgaaggtatcgtgccgaacctg
gagcggcgttatcgcgagaccgaatcggccagcgtgcgcgaagaactggccaagttcctc
agcacccagccctgccccgattgccgcggtacccgcttgcgtcgggaggcgcgacatgtg
tgggtcggcgagaaaaccctgccggcggtgaccaacctgccgattggggacgccaccgac
tacttcggcggcttgaagctcaccggccgccggggcgaaattgccgacaagatcctcaag
gaaatccgcgagcgcctgcaatttctggtgaacgttggcctggactacctgaccctcgat
cgcagcgcagataccttgtccggcggcgaagcccagcgtattcgcctggccagccagatc
ggtgccggcctggtgggggtgatgtacatcctcgacgaaccgtccattggcctgcaccag
cgggacaacgatcgactgctcgggacgctcaagcacctgcgggacatcggcaacacggtg
atcgtggtcgaacacgacgaggatgcgatccgcctggcggattacgtcgtggacatcggt
ccgggtgcgggggtgcatggcgggcatatcgttgcccaaggcacagccgccgaagtcatg
gcgcatcccgactccctgaccggcaaatacctgtcgggccgggtgaagatcaaggtgccg
gccaagcgtacgccgcgcaacaagaagctgtcgctgagcctcaagggcgcccgtggcaac
aacctgcgcaacgttgacctggacatcccgattgggctgctgacttgcgtgaccggtgtg
tccggctccggcaaatcgacgctgatcaacaacaccctgttccccctcagcgctacggcc
ctgaacggcgccacgaccctggaggccgccgcccacgacagcatcaagggcctggagcat
ctggacaaggtcgtcgacatcgaccagagccccatcggtcgcacaccgcgctccaacccg
gcgacttataccgggctgttcacgccgattcgcgagctgttcgccggcgtgccggagtcc
cgttcacgcggctatggcccagggcgtttctcgttcaacgtcaagggcgggcgctgcgaa
gcctgccagggcgacggcctgatcaaggtcgagatgcacttcttgccggacatctatgtg
ccgtgcgacgtgtgcaagagcaagcgctacaaccgcgaaaccctggagatcaagtacaag
ggcaagaatatccacgaaaccctcgagatgaccatcgaagaggccagggtgttcttcgac
gcggtgccggccctggcgcgcaagctccagacgctgatggatgtggggctgtcgtacatc
aagcttgggcaatcggcaaccacgttgtccggcggcgaggcccagcgggtcaagctgtct
cgcgagctgtccaagcgtgataccggcaagaccctgtacatcctcgacgagccgaccacg
ggcttgcacttcgctgatatccagcaattgctcgacgtcctgcatcgccttcgcgaccat
ggcaacaccgtggtggtaattgagcacaacctcgatgtgatcaagacggcggactggctg
gtggacttggggccggaaggcggctccaagggtggtcagatcatcgcggtgggtaccccc
gaggaagtggccgagatgaagcagtcgtacactggctactacctcaagccgttgctggag
cgtgaccgggactga
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integrated database retrieval system
