Pseudomonas rhizophila: CRX69_07560
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Entry
CRX69_07560 CDS
T09779
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz00550
Peptidoglycan biosynthesis
prhz01100
Metabolic pathways
prhz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CRX69_07560 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CRX69_07560 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prhz01011
]
CRX69_07560 (mrdA)
Enzymes [BR:
prhz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CRX69_07560 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
prhz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CRX69_07560 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AVU75067
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All DBs
Position
1639308..1641203
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AA seq
631 aa
AA seq
DB search
MPQPIRIKDHEKDARLVRGRVVFGAIAVVALIGVLIARLYFLQVIQYEYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQKVLDVIVEVLQLTPEDRAIFE
KRMRQGRRPFEPVPILFELTEEQIALIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYM
GRINEKELKNLDPVNYSGTHHIGKTGIERFYEAELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPNTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVITASSRVYDPGYYQLPNY
DHKYRNWNRSGDGYVDLETAIMRSNDTYFYDLAHKLGIDRLASYMGKFGLGQKVSLDMFE
ESPGLMPSREWKRATRRQPWFPGETLILGIGQGYMQATPLQLAQATALVASKGKWYRPHL
AKTIEGQKPVDPNPVPDIILRNPSDWQKVNIGMQQVMHGARGTARKAAIGAQYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPAENPKIVVSVMVENGESGSGVAAPVVR
QIMDAWLLDEHGQLKPEYASPITAEATAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagccgatccgcatcaaggaccacgaaaaagacgcccgcctggtgcgtggtcgc
gtcgtgttcggtgcaattgcggtcgtggcgctgattggtgtgctgatcgcgcgcctgtat
ttcctccaggtgattcagtacgagtaccactcgaccctgtcggaaaacaatcgcgtgcat
gtgcagccgattccgccgactcgcgggttgattttcgaccgcaacggcgtggtggtggcc
gataaccggcccagcttcagcctgagcatgacccgtgagcgttccggggattggcagaag
gtgctcgacgtgatcgtcgaagtgctgcaactgacccccgaggaccgggcgattttcgag
aagcgcatgcgccagggccggcgcccgttcgagccggtgccgatcctgttcgagctgacc
gaagagcagatcgccctgatcgccgtgaaccagttccgcctgccgggcgttgaagtggtg
gcgcagttggtgcgtcactacccccaaggcgcgcacttcgcccattcggtgggctacatg
gggcggatcaacgaaaaagagctcaagaacctcgacccggtcaattacagcggtacccac
cacatcggcaagaccggcatcgagcgcttctacgaggccgaactgcacggccaggtgggc
tacgaggaagtcgagaccaatgcccgtggccgcgtgttgcgggtgctcaagcgcaccgac
ccgatccccggcaaggacatcgtcctgagcctggacatcaaattgcaggaagccgccgaa
gcggcgttgggcggccggcgcggcgctgtcgtggcgctggacccgaacaccggcgaggtc
ctggcgatggtcagccagccgagtttcgacccgaacctgttcgtcactggcatcagtttc
aaggcctatgccgagttgcgcgattccatcgatcggccactgttcaatcgcgtgctgcgc
ggcctctatccgccgggttcgaccatcaagccggcggtggccattgccgggctggacgcg
ggtgtgatcaccgcttccagccgggtctacgaccccggttattaccaactgccgaactac
gaccacaagtaccgcaactggaatcgctccggcgacgggtacgtggatctggaaacggcg
atcatgcggtccaacgacacctacttctatgacctggcccacaagctggggatcgaccgg
ctggcgtcctacatgggcaagttcggtctcggtcagaaagtgtccctggacatgttcgaa
gagtcgccgggcctgatgccatcccgcgagtggaagcgggcgacccgccgccagccgtgg
ttcccgggtgagacgttgatcctggggatcggccagggctacatgcaggcgacgccgctg
caactggcccaggccacagccctggtggcgagcaaaggcaagtggtatcgcccgcatctg
gccaagaccatcgaaggccagaagcccgtggaccccaacccggtgccggacatcatcctg
cgtaatccgtcggactggcagaaggtcaatatcggcatgcagcaggtgatgcacggcgcc
cggggcaccgcgcgcaaggctgccatcggcgcgcaataccggattgccggcaagagtggt
acggcccaggtggtcgcgatcaagcagggcgagaagtacgaccgttccaaggttcaggag
cgccaccgcgaccacgccttgttcgtcggtttcgcaccggccgaaaacccgaagatcgtc
gtgtcggtgatggtcgagaacggcgagtccggctccggcgttgccgcgccggtggtgcgc
cagatcatggacgcctggctgctggatgaacacggccagctcaagcccgaatacgcaagc
cccatcactgcggaggctacggcccgtgaagaataa
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