Pseudomonas rhizophila: CRX69_08120
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Entry
CRX69_08120 CDS
T09779
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prhz
Pseudomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prhz03016
]
CRX69_08120
Enzymes [BR:
prhz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CRX69_08120
Transfer RNA biogenesis [BR:
prhz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CRX69_08120
Prokaryotic type
CRX69_08120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AVU78698
LinkDB
All DBs
Position
1773287..1774204
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLLERPVTVGQADIEAVLPGFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFDGNTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgccgtaacgtcagcggcatcatcctgctcgacaaaccg
ctggggttcacctccaacgcggcgttgcagaaggttcgctggctgctcaatgccgagaaa
gccgggcacaccggcagccttgatccgctggctaccggcgtgttgccactgtgttttggc
gaggcgaccaagttctctcagtatttgctcgattcggacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggcggacgccgaaggtgaggtgttgctggagcggccg
gtgaccgttggtcaggctgatatcgaggctgtgttgccgggttttcgcggacaaatcagc
cagataccgccgatgtactctgctctcaagcgtgatggccagccgttatacaaactggcc
cgtgcaggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgacggtaatactgcgcggctggcagtcgattgcagcaagggcacctatatc
cgcaccctagtggaggatatcggtgaaaagctcggctgtggtgcgtacgtggccgaactg
cgacggacccaggccggacctttcacgctggcccagacggtcacgctggaagagctcgaa
gcggtacatgccgaaggcggcaacgaagcggttgaccgtttcctgatgccatcggacagc
ggcctgctggactggccgctgttgcagttctccgagcacagcgcgttctactggctcaac
ggccaaccggtacgtgctccggatgcaccgaagttcggcatggtacgggtacaggatcac
aatggccgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
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