Pseudomonas rhizophila: CRX69_08130
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Entry
CRX69_08130 CDS
T09779
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRX69_08130 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prhz03019
]
CRX69_08130 (pnp)
03016 Transfer RNA biogenesis [BR:
prhz03016
]
CRX69_08130 (pnp)
Enzymes [BR:
prhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CRX69_08130 (pnp)
Messenger RNA biogenesis [BR:
prhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CRX69_08130 (pnp)
Transfer RNA biogenesis [BR:
prhz03016
]
Prokaryotic type
tRNA degradation factors
CRX69_08130 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AVU75168
UniProt:
A0ABN5JPV9
LinkDB
All DBs
Position
1774792..1776897
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQAEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPTAAEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgta
ttggtgaccgttgtcggtgccaagcaagccgatccaggcaagggcttcttccctctgtct
gtccactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaggaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagactgatccggacatcgctgcgatgatcggtacttcggccgcgctggcgatc
tccggcattcctttcgatggtccgatcggcgctgcccgcgttgcgttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactgaaagcttcgagcctggacatggtcgtg
gccggtacttccgaagccgtgctgatggttgaatccgaagccaaagagctgaccgaagac
cagatgctgggcgctgtactgttcgcccacgacgagttccaggtggtgatcaacgccgtc
aaggaactggccgccgaagccgccaagccaacctggacctgggctccgcaagccgaagcc
accgagctgctgggcgcgatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccgtcaaggccgaccgttatgcgcgcctgggcgagctgaaagaccaggtggttgcc
aagctgtccggtgaagaaggccagccgactgccgctgaagtcaaagccgctttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggtcgc
gacactcgcaccgtacgtccgctgaacattgaagtcggcgttctgccaaagacccacggt
tcggcgctgttcacccgtggcgaaacccaggccctggtcgttgcaacactgggcaccgcc
cgtgacgcgcaactgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgccggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggtccaggccatgctgccagccgctgac
gtgttcccgtacaccattcgcgtggtatcggaaatcaccgagtccaacggttcgagctcc
atggcttcggtctgcggcgcttccctggccctgatggacgccggtgtgccgatgaaggct
ccggttgccggtatcgccatgggtctggtgaaagaaggcgagaagttcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtggccggtaccgcc
aaaggcgtgaccgcactgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgccctgggccaagccctggaagcgcgcctgaacatcctgggccagatgaaccag
atcattggtcagtcgcgtaccgagttgtcggaaaacgctccgacaatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgaccatccgtgcgatc
tgtgaagaaaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggcagaagcagcacgtcagcgcgtcctgggcatcaccgcagaagcc
gagatcggcaagatctacgtgggcaaggttgagcgtatcgtcgacttcggcgcgttcgtc
aacatcctgccgggcaaggacggtctggttcacatctccatgctgagcgatgctcgcgtc
gagaaagtgaccgacatcctcaaagaaggtcaggaagtggaagtgctggtactggacgtg
gacaaccgcggtcgtatcaagctgtccatcaaggacgtagcggcagccaaggcgtcgggc
gtttaa
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