Pseudomonas rhizophila: CRX69_08745
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Entry
CRX69_08745 CDS
T09779
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CRX69_08745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prhz03021
]
CRX69_08745
Transcription machinery [BR:
prhz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CRX69_08745
BRITE hierarchy
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
HTH_20
GerE
HTH_28
HTH_5
TnsD
HTH_10
HTH_7
HTH_IclR
HTH_11
HTH_38
HTH_40
HTH_29
Xre-like-HTH
Trp_repressor
HTH_36
MarR_2
HTH_DeoR
HTH_26
HTH_17
RWP-RK
HTH_31
HTH_AsnC-type
LacI
Motif
Other DBs
NCBI-ProteinID:
AVU75287
LinkDB
All DBs
Position
complement(1916240..1916728)
Genome browser
AA seq
162 aa
AA seq
DB search
MPPAHTVEVLYNAHHSWLNGWLRRKLGCPDSAADLAQDTFMRVLTARDPQPVLEPRAFLT
TIAKRVLFNHYRRQDLERAYLDTLAQLPEQVVPSEEERAIILQSLMELDQLLDGLPRAVK
QAFLLAQVDGLTYNEIARELGISLATVKRHLNKAAMRCYFAL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcctgcacacaccgtcgaagtgctctacaacgcccatcacagttggcttaacggc
tggttgcgaagaaaactcggctgccccgacagtgccgccgacctggcccaggacacgttc
atgcgcgtactgactgcgcgcgacccgcagcctgtcctggaaccccgggcgtttcttacg
accattgccaagcgcgtactgttcaaccactaccgacgccaggaccttgagcgcgcctac
ctcgataccctcgcccaactgccggagcaggtggtgccgtcggaggaagaacgggcaatc
atcctgcaaagcctgatggaactggaccaactgctcgatggtttgccgcgagcggtcaag
caggcgtttctgctggcccaggtcgatggcctgacctacaacgaaatagcccgtgaactg
ggaatttcattggcgacggtcaagcgtcatttgaacaaggcagcgatgcgctgctacttc
gccttatga
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integrated database retrieval system