KEGG   Pseudomonas rhizophila: CRX69_08745
Entry
CRX69_08745       CDS       T09779                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
prhz  Pseudomonas rhizophila
Pathway
prhz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:prhz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CRX69_08745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prhz03021]
    CRX69_08745
Transcription machinery [BR:prhz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CRX69_08745
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_24 HTH_23 HTH_20 GerE HTH_28 HTH_5 TnsD HTH_10 HTH_7 HTH_IclR HTH_11 HTH_38 HTH_40 HTH_29 Xre-like-HTH Trp_repressor HTH_36 MarR_2 HTH_DeoR HTH_26 HTH_17 RWP-RK HTH_31 HTH_AsnC-type LacI
Other DBs
NCBI-ProteinID: AVU75287
LinkDB
Position
complement(1916240..1916728)
AA seq 162 aa
MPPAHTVEVLYNAHHSWLNGWLRRKLGCPDSAADLAQDTFMRVLTARDPQPVLEPRAFLT
TIAKRVLFNHYRRQDLERAYLDTLAQLPEQVVPSEEERAIILQSLMELDQLLDGLPRAVK
QAFLLAQVDGLTYNEIARELGISLATVKRHLNKAAMRCYFAL
NT seq 489 nt   +upstreamnt  +downstreamnt
ttgccgcctgcacacaccgtcgaagtgctctacaacgcccatcacagttggcttaacggc
tggttgcgaagaaaactcggctgccccgacagtgccgccgacctggcccaggacacgttc
atgcgcgtactgactgcgcgcgacccgcagcctgtcctggaaccccgggcgtttcttacg
accattgccaagcgcgtactgttcaaccactaccgacgccaggaccttgagcgcgcctac
ctcgataccctcgcccaactgccggagcaggtggtgccgtcggaggaagaacgggcaatc
atcctgcaaagcctgatggaactggaccaactgctcgatggtttgccgcgagcggtcaag
caggcgtttctgctggcccaggtcgatggcctgacctacaacgaaatagcccgtgaactg
ggaatttcattggcgacggtcaagcgtcatttgaacaaggcagcgatgcgctgctacttc
gccttatga

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