Pseudomonas rhizophila: CRX69_09940
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Entry
CRX69_09940 CDS
T09779
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CRX69_09940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_09940
Enzymes [BR:
prhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRX69_09940
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CRX69_09940
RecFOR pathway proteins
CRX69_09940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_16
TIP49
AAA_14
nSTAND3
AAA_17
RNA_helicase
Rad17
AAA_2
ABC_tran
AAA_28
AAA_18
NTPase_1
NB-ARC
AAA_24
TsaE
SAM_Ribosomal_mS41
RsgA_GTPase
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AVU75509
LinkDB
All DBs
Position
2205625..2206686
Genome browser
AA seq
353 aa
AA seq
DB search
MIEADRLIAATGAPRDREEVQDRAIRPVSLADYIGQPAVREQMELFIQAARGRSESLDHT
LIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRL
SPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV
QRLEFYNNADLATIVGRSAGILGLPLDPDGAYEIARRARGTPRIANRLLRRVRDFAEVRA
KGHITKPIADLALNLLDIDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIE
DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPTRMGEMPVVDEFLDAVDD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagccgatcgtctgatcgccgccacgggtgccccccgtgaccgtgaagaagta
caagaccgtgcgattcgtcccgtcagtctggccgattacatcggtcagccggcggttcgc
gagcaaatggaactgtttatccaggcggcccgtgggcgcagcgagtctctggaccatacc
ttgatcttcggcccacccggtttgggcaagaccaccctggccaacatcatcgcccaggag
atgggcgtgtcgatcaagagcacgtccgggccggtcctcgagcgtccgggtgacctggcg
gcgctgctgaccaatcttgagccccatgatgtgctgttcatcgacgaaatccaccggctg
tcgccgatcgtcgaggaagtgctgtacccggcgatggaagatttccagctcgatatcatg
attggcgaggggccggcggcccgttccatcaagctcgatctgccgccgttcaccctggtg
ggcgccacgacccgcgccggcatgttgaccaacccgctgcgggaccgtttcgggatcgtc
cagcgcctggagttctacaacaacgccgatctggcgacgatcgtcggccgctcggccggc
attctcgggttgccgctggacccggatggcgcttatgagatcgcccggcgggcgcggggt
acaccgcggatcgccaaccggctgttgcgtcgggtccgggattttgccgaagttcgcgcc
aagggccacatcaccaaaccgattgccgacctggcgttgaacctgctggatatcgacgag
cgtggtttcgaccaccaggaccggcgcctgctgctgaccatgatcgagaagttcgacggc
ggtccggtgggcgtggacagcctggcggcggccatcagcgaagagcgccataccatcgaa
gatgtgctggaaccgtacctgatccagcagggctacatcatgcgcacccctcgcgggcgt
gtggtgacgcgtcacgcctatctgcatttcggcttaaacatcccgacacgaatgggtgag
atgccggtggtagacgaattcctcgatgccgtggacgattga
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