Pseudomonas rhizophila: CRX69_12580
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Entry
CRX69_12580 CDS
T09779
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz02020
Two-component system
prhz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CRX69_12580
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CRX69_12580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
prhz02022
]
CRX69_12580
02035 Bacterial motility proteins [BR:
prhz02035
]
CRX69_12580
Two-component system [BR:
prhz02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CRX69_12580
Bacterial motility proteins [BR:
prhz02035
]
Flagellar system
Flagellar assembly proteins
Others
CRX69_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_2
MCM
AAA
HTH_20
HTH_30
MerR
AAA_3
FleQ
AAA_19
HTH_23
nSTAND3
HTH_24
ATPase
HTH_11
HTH_28
Sigma70_r4_2
RsiG
DUF2249
HTH_1
AAA_22
HTH_17
AAA_14
AAA_7
Myosin_head
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AVU75996
LinkDB
All DBs
Position
2739206..2740594
Genome browser
AA seq
462 aa
AA seq
DB search
MAIKVLLVEDDRALREALADTLVLAGHDYTAVGSAEDALLAVAQETFGLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHALG
SPAVEGEGPVAIEPASAQLLALAARVARSDSTVLISGESGTGKEVLARYIHQQSRRASEP
FIAINCAAIPDNMLEATLFGHEKGSFTGAISAQAGKFEQADGGTILLDEISEMPLGLQAK
LLRVLQEREVERVGARKPISLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPL
RERTADILPLAERLLTKHVNKMKHAAARLSPEAQAFLIAYPWPGNVRELDNAIQRALILQ
QGGLIQPEDFCLSGPVACAPLPAVSAVPAFAPPAEVEGESAGALGDDLRRREFQMIIDTL
RAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaggtgttactggttgaggatgaccgggccctgcgtgaggcgctggccgat
accctggtgctggccgggcacgattacaccgccgtcggttcggcggaagatgctttgctg
gccgtggctcaagagaccttcggcctggtggtcagtgacgtcaacatgccgggcatggat
gggcaccagctgcttggtttgttgcgcgcccgccaacctcaattgccggtcctgctgatg
actgcccacggtgccgtcgagcgtgccgtggatgccatgcgccagggggctgcggattat
ctggtcaagccgttcgagcccaaggcgctgttggacctggtggcccgccatgccttgggc
agccctgccgtcgagggtgaaggcccggtcgcgatcgaaccggccagtgcgcagttgctg
gcgttggccgcgcgggtggctcgcagcgactccactgttttgatttccggcgaatccggc
accggcaaggaggtgctggcgcgctacattcaccagcaatcccggcgtgccagcgaaccg
ttcattgccattaactgtgcggcgattcccgacaatatgttggaggcgacgctgttcggt
cacgagaagggctcgtttactggcgccatctcggcccaggccggcaagttcgagcaggct
gacggtggcaccattctgctcgatgaaatttccgaaatgccccttggcctgcaagccaag
ctgttgcgcgtgttgcaggagcgggaagtggagcgggtgggtgcgcgcaagcctatcagc
ctggatatccgcgtggtggcgaccaccaaccgcgacctggctggcgaagtggcggcaggg
cgttttcgcgaagacctttactaccgtctatcagtatttccgctggcctggcgaccgttg
cgcgagcgcaccgccgatatcctgccgctggccgagcgtctgctgaccaaacacgtcaat
aaaatgaagcatgcggcagccaggctgtcccccgaggcccaggcgtttctgatcgcctac
ccttggcctggcaacgtacgggagctggataacgcgattcagcgggcattgattctgcag
cagggcggtctgatccagccggaagatttttgcctgagcggtccggtggcctgcgcgcca
ttgccggccgtgtcagcggtcccggcgttcgcccctccggcggaagtggagggcgaatcg
gccggtgctttgggagacgacctgcgtcgtcgcgaattccagatgatcatcgacaccctg
cgcgccgagcgcgggcgtcgcaaggaagcggccgagcgcttggggatcagcccgcgcacc
ctgcgctacaagctggcgcaaatgcgtgacgccggcatggacgtcgaggcctacctgttc
gccagttga
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