Pseudomonas rhizophila: CRX69_12960
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Entry
CRX69_12960 CDS
T09779
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
prhz
Pseudomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prhz03032
]
CRX69_12960
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_12960
Enzymes [BR:
prhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CRX69_12960
DNA replication proteins [BR:
prhz03032
]
Prokaryotic type
DNA Topoisomerases
CRX69_12960
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CRX69_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVU76067
UniProt:
A0ABN5JSG1
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All DBs
Position
2819472..2822135
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AA seq
887 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESTA
VVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHYIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEGVAFDGTLATDVDDMTGDQPLDAAADEEEPQD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtaatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagcccgtgcaccggcgcgtgctgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatcagcccgtgtcgtcggtgatgtgatcggtaagtatcacccccac
ggtgacaccgccgtgtacgacaccatcgtccggatggcccagccattctccctgcgctac
ttgctggtagacggccagggcaactttggttccgtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcccacgaactgctggccgacctgcataag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtatcccgaacctgctggtcaacggctccagcggtatcgccgtgggcatggcgacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaat
cccgagctgacggtcgatgagttgatgcagtacatccctggtcctgacttcccgaccgct
gcgatcatcaacggtcgcgccggtatcatcgaagcctaccgcaccggtcgcggccgcatt
tacatgcgcgcccgctcgaccatcgaagacatcgacaaggtcggtggtcgccagcagatc
gtcatcaccgaactcccgtaccagctgaacaaggcccgtctgatcgagaagatcgccgag
ctggtgaaagagaagaagcttgaaggcatcaccgagctgcgggacgagtccgacaaggac
ggcatgcgcgtcgtgatcgaactgcgtcgcggcgaagtgcccgaggtgatcctcaacaac
ctctatgcccagacccagctgcaagcggtgttcggcatcaacatcgtggcgctgatcgac
ggccgtccgaggatcctgaacctcaaggatctgctggaagccttcgtgcgtcaccgtcgc
gaagtggtcacccgccgcaccgtgttcgagctgcgcaaggcccgcgagcgtggtcatatc
ctcgaaggccaggccgttgccctgtcgaacatcgacccggtcatcgctctgatcaaggcc
tcgccaaccccgtcggaagccaaggaagcgctgatcagcacgccttgggaatccaccgcg
gtagtggcgatggtcgagcgtgccggcgccgactcgtgccgtccggaaaacctcgacccg
caatacggcctgcgcgatggcaagtacttcctgtccccggaacaggcgcaagccatcctg
gaactgcgtctgcaccgcctgaccggcctggaacacgagaagctgctggctgaataccag
gaaatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgacgtgcgccgcact
gagattctcgatgcgcgcctggacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggcggctacgccaagacccagccgttggccgcctatcaggcc
cagcgtcgcggtggtaaaggcaagtcggccacaggcgtcaaggacgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgttgctgttctccagcaagggcaaggtg
tactggctcaagacctacgaaatccccgaagcgtcccgtgccgcccgtggtcgtccgctg
gtcaacctgctgccgctcgatagcgatgagtacatcactaccatgctgccggtggaggaa
tacaccgaaggtcattacatcttcatggccaccgccaagggcaccgtgaagaagactccg
ctggaatccttcagccgtcagcgcagtgttggcctgatcgccctggagctggacgaaggt
gacgtactgatttccgctgccatcaccgacggtgagcgtgaggtcatgctgttctccgac
ggcggcaaggttactcgtttcaaggaatccgacgttcgcgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgatccccgaa
gaaggcagccagatcctcaccgcttcggcgcgtggatatggcaagcgcacggccatcagc
gaattccctgagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgaccgt
aacggtcgtctggtcggcgctgtccaggtgctcgatggcgaggagatcatgttgatctcc
gaccagggcaccttggtgcgcacgcgggtggccgaagtgtcgagcctgggtcgtaacacc
cagggtgtgacgttgatcaagctggccagcgacgaaacgctggtcgggcttgagcgggtg
caggagccatcggaagtcgaaggcgaggagctggaaggcgaggagggcgtggcgttcgac
ggcactcttgctaccgacgttgacgacatgaccggcgaccaaccgctcgacgctgccgca
gacgaagaagaaccgcaggactaa
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