Pseudomonas rhizophila: CRX69_14565
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Entry
CRX69_14565 CDS
T09779
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
prhz
Pseudomonas rhizophila
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prhz03000
]
CRX69_14565
Transcription factors [BR:
prhz03000
]
Prokaryotic type
Helix-turn-helix
Other families
CRX69_14565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
HTH_20
AAA_2
nSTAND6
AAA
HTH_7
HTH_23
HTH_22
HTH_11
HTH_AsnC-type
AAA_3
AAA_7
HTH_24
HTH_10
HTH_36
HTH_28
Mg_chelatase
nSTAND3
HTH_Tnp_1
AAA_16
HTH_1
HTH_psq
Phage_CI_repr
Motif
Other DBs
NCBI-ProteinID:
AVU76356
UniProt:
A0ABM6UFR0
LinkDB
All DBs
Position
complement(3201036..3202880)
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AA seq
614 aa
AA seq
DB search
MAAPAPALSHEAIIQASWSRCRAFGLNHQSVPAFDQLPAEGIAQLLESQHSLVQTTHQEV
LPYYENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLAHGFSAGASWMERCSGTNAIGT
ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDAERKVIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNLFRGEHFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNLLGLR
LSRVSIESLFKVSLLELLNQPDGLPFALQASGSNRFQCLLRRPQQVTVKARVFSEPAPSS
APAANVISLNTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRS
KQPFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADRGTLFLDEIGDMPLP
TQARLLRVLQERCVQPVGSAELFAVDIRIISATNRSLREQVQLGRFREDLYYRIGGLTLE
LPPLRERNDKQALFKRLWEHHREPTQWAGLSREVLDLFERHPWPGNLRQVSSVLQVALAM
AEEQPIRPEHLPDDFFIDLEMEPVETPEPLTVDLNDVEDLNRQLQAVGGNISHLARRLGV
SRNTLYKRLRQLES
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacctgctccagccttgtcccacgaagccatcatccaggcctcctggtcccgc
tgccgcgcctttggcctgaatcaccagagtgtgcctgccttcgatcaattgcccgcagaa
ggcattgcccagttgctggaaagccagcattcgctggtgcagaccacccaccaggaagtc
ctgccgtattacgagaatatcctgagcaactccaattgcctgatcatgctggccgacaac
cagggccaggtgctgacctcgtgggggacccagcgctttatcgaaccgaaactggcccat
ggtttcagcgccggggcgagctggatggagcgctgcagcggcaccaatgccatcggcacc
gccctggcctgtgaacaggcggtgcacatcgaacacgatgaacacttcctcaaggccaac
cgcttcatgaccggctccgccgcgccgatcttcgacgccgagcgcaaggtcatcgcagtg
ctggacgtttccagcgacagctacctgccgccctcccacaccctgggcatggtcaagatg
atgagccagaccgtggaaaaccggctgatcctcaacctgtttcgcggtgagcatttccaa
ctgaccttcaacaccggcttgaacaacctcgacagccaatgggccgggctgctgattttc
gatgaaaccggccaggtgctctccgccaaccgccgcgccgacaatctgctgggcctgcgc
ctgtcacgggtgagcatcgaaagcctgttcaaggtttcgctgctggagctgctgaaccag
cccgacggcctgccgttcgccctgcaagcgtcggggagcaatcgcttccagtgtttgctc
agacgcccgcaacaggtgacggtcaaggcccgggtcttcagcgagccagcgccctcgtcc
gcccccgccgcgaacgtgatcagcctcaataccctgcacttcggcgacagccgcgtggaa
aaagccgtacgccaggccgagcgcttgctggagaaggacattccactgctgatccacggc
gaaaccggggtcggcaaggaagtgttcgtcaaagcccttcaccaggccagctcccgcagc
aagcagccgttcattgcggtcaactgcgcggcgatccccgccgagctggtggaatcggaa
ctgttcggttatgaaaaaggcgccttcaccggcgccaatcaaaaaggcagtatcggcctg
atccgcaaggccgaccgcggcaccctgttcctcgatgagatcggtgacatgcccctcccg
actcaggcccgattgctgcgagtattgcaagagcgttgcgtgcaaccggtgggcagcgcc
gagctgtttgcggtggacattcgtatcatctccgccaccaaccgctcgttgcgcgaacag
gtgcaactgggccggttccgcgaagacctgtactaccgcatcggcggcctgaccctggaa
ctgccacccctgcgcgaacgcaatgacaaacaggccctgttcaaacgtctttgggaacac
caccgcgaacccacacaatgggccggcctgagccgcgaagtgctggatctgttcgaacgc
catccatggccaggcaacctgcgccaggtcagcagcgtgctgcaagtggccctggcgatg
gccgaagagcagccgatccgaccggaacatctgccagacgacttcttcattgatcttgaa
atggagccggtggaaacaccggagccgctgacagtcgacctgaacgatgtcgaggacctg
aaccgtcagttgcaggcggtgggcgggaacatttcgcacctggcgcggcggctgggggtc
agccgcaacaccttgtacaagcgcctgcgacaacttgaaagctga
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