Pseudomonas rhizophila: CRX69_15960
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Entry
CRX69_15960 CDS
T09779
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz02025
Biofilm formation - Pseudomonas aeruginosa
prhz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CRX69_15960 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CRX69_15960 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prhz02044
]
CRX69_15960 (clpV)
Secretion system [BR:
prhz02044
]
Type VI secretion system
Imp/Vas secretion system core components
CRX69_15960 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_22
AAA_16
nSTAND3
Zeta_toxin
AAA_7
NBD_SMAX1
ResIII
AAA_25
AAA_14
T2SSE
IstB_IS21
ClpB_D2-small
Sigma54_activat
NACHT
SRP54
AAA_23
FtsK_SpoIIIE
DUF1192
IPT
Motif
Other DBs
NCBI-ProteinID:
AVU76614
UniProt:
A0ABM6UGE7
LinkDB
All DBs
Position
complement(3493997..3496540)
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AA seq
847 aa
AA seq
DB search
MELASLIGRLNPDNRRALERAAQRCLQRSHHYVEIEHLLLELLDIEGGDFACLLPRFGLE
RDAVAAEINKALELFKSGSTRTPALSTQTIGLLEDAVVQASVLGLDSIRSGLLLLALLDR
DERRSLLLNSASSLLRIPREALRAHLLEWTESSREHVGGVRPVKPGEAPPKQDPVLDQYT
QDLTADARDGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAA
GDVPPSLQEVTLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSAEKPIILFIDEAHTLIG
AGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALARRFQLVQVEEPDELT
AVEMLRGVATKLEQHHGVHVLDAAIQEAVKLSHRYISGRQLPDKAISVLDTACARVALGQ
HDVPPPLESLRHRQNSLKDEVERLRREQATGLDHRERITLLETESSGNVQAIRELETRWG
EEREAVRELLDTRRELLALSERADGEKPDTEIDNRIDHLAAELLRLEAGLDAIRQDDPLV
PEQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGLRVMGQDTALNTIAQRLQAY
RAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLK
GAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVV
DFKNTVMLATSNVGAELLLDTPAAQLGSDAFNEALHKVLLQAFRPAFLARMTVVAYRPLE
EATLEAIVLAKLEKLRGRYKAATGKQFEFDAGIVKAVLAKCSAAGARDVENVLMTQVTGK
LAEWVLE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccagcctgatcggacgcctcaacccggacaaccgtcgcgccctggaacgc
gccgcgcaacgctgcctgcaacgcagccatcactatgtggaaatcgagcacctgctgctg
gaactgctggacatcgaaggcggtgactttgcctgcctgttgccgcgctttggcctggag
cgcgacgcggtggcggcagaaatcaacaaggccctggagctgttcaaatccggcagtacc
cgcacgccggccctgtcgacgcaaaccatcggcctgctggaagatgctgtggtgcaggcc
agcgtgctgggcctggacagcattcgttccggcttgttgttgctggcactgctggaccgt
gatgagcgtcgcagcctgttgctcaacagtgcctcgtcgctgctgcgcattccccgggag
gccttgcgcgcccatctgttggaatggaccgaaagctcgcgggaacatgtcggcggcgtg
cgcccggtaaaacccggtgaggcaccaccgaaacaggacccggtgctcgaccaatatacc
caggacctgaccgccgacgctcgggacggacgcatcgatcccatcgtcggacgcgacggt
gagattcgtcagtgcatcgatatcctgctcagacgtcggcagaacaacccgatcctggtg
ggcgcgccgggcgtcggcaaaaccgccgtggtggaagggctggccctgcgcattgccgca
ggcgacgtgccaccgtcgttgcaggaggtcactttgcgcgtgctggatctgggcctgttg
caggccggcgcgggcgtcaagggcgagttcgaacagcgtctcaaaggcgtgattgacgct
gtacgcagcgctgaaaaaccgatcattctgtttatcgacgaagcccacaccctgatcggt
gccggcggcgctgaaggtggcagcgatgcggccaacctgctcaaaccggccctggcccgg
ggtgaactgcgcaccctggccgccaccacctggctggaatacaaaaaatacttcgagaaa
gacccggccctcgcccgccgcttccaactggtgcaggtcgaagaaccggacgaactcacc
gccgtggaaatgctccgtggcgtagcgaccaaactggaacaacaccacggcgtacacgtg
ctggatgcggccattcaggaggcggtgaagctgtcccaccgctacatttccgggcgacag
ttgccggacaaagccatcagcgtgctcgacaccgcctgcgcgcgggtcgccctcggccaa
cacgatgtgccgccgcccctggaaagcctgcgccatcgccagaacagcctcaaggacgaa
gtcgaacgcttgcgccgtgaacaggccaccggactggatcaccgcgagcgcatcaccctg
ctggaaaccgagtcgagcggcaacgtgcaggccatccgcgagctggagacccgctggggt
gaagagcgcgaagcggtgcgcgaactgctcgacacccgccgcgagctgctggccttgagc
gagcgcgccgacggtgaaaagcccgacaccgagatcgataaccgcatcgaccacctggct
gccgaactgctgcgtctggaggccggcctggatgccattcgccaggacgatccgctggta
cccgaacaggtggacagcaagaccgtcgccgccgtgatcgccggctggaccggcatcccg
gtaggcaagatgctcgccgacgaagcccacgccgtgcgcaccctcggtcagcgcatgggc
ctgcgggttatgggccaggacaccgcgttgaacaccatcgctcagcgcctgcaagcctac
cgcgccggcctgaccgatccgcagaagccggtcggcgtattcctgctggtgggccccacc
ggcgtgggcaagaccgaaaccgcctacgccctggccgatgccttgtatggcggcgaacgc
aacctgatcagcatcaacctttcggaataccaggaagcccacaccgtcagccaactcaaa
ggcgccccgcccggctatgtcggctacggcagcggcggtgtgctcaccgaagcggtgcgg
cgcaaaccctactcggtggtgttgctggatgaaatcgaaaaggcccacccggatgtgctc
gaggccttctacaacgtcttcgacaaaggcctgatggaagacggcaccggcctggtggtg
gacttcaagaacacggtgatgctcgccaccagcaacgtcggcgccgaactgctcctggac
acgccagccgcgcaactgggcagcgacgccttcaacgaagccttgcataaagtcttgctg
caagcgtttcgccccgcattcctggcgcgcatgacggtggtggcgtatcggccgctggag
gaggcgacgctggaagccattgtcctggccaagctggagaaactgcgtgggcggtataag
gccgcgaccggcaagcagttcgagttcgacgcagggatcgtcaaggccgtgttggccaag
tgcagcgcggcaggagcaagggatgtggagaatgtgttgatgacgcaggtgacggggaag
ttggcggagtgggtgttggagtga
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