KEGG   Pseudomonas rhizophila: CRX69_16400
Entry
CRX69_16400       CDS       T09779                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
prhz  Pseudomonas rhizophila
Pathway
prhz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:prhz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CRX69_16400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prhz03400]
    CRX69_16400
DNA repair and recombination proteins [BR:prhz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CRX69_16400
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CRX69_16400
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 SMC_N nSTAND1 AAA_29 DnaJ_CXXCXGXG AAA_16 AAA_25 RsgA_GTPase MCR
Other DBs
NCBI-ProteinID: AVU76700
LinkDB
Position
complement(3609037..3611694)
AA seq 885 aa
MPPRSGPASASPLPEDTGFVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFST
LYAEAQRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTL
SSLIRMLYSRAGSYPADQPMLYAEDFSPNTPQGACQQCHGLGRVYEVTEASMVPDPSLTI
RERAVAAWPMAWQGQNLRDILVTLGYDVDVPWRDLPKKQRDWILFTEETPTVPVYAGLTP
AQTRAALKRKLEPSYQGTFSGARRYLLHTFMHSQSAQMRKRVAQYMRASPCPVCEGKRLK
RQALTVTFAGLDIAELSHLPLLELAEVLKGVAAPDYLAQAEEPGTTLTHQQTREAREQRA
ARGENPHAGGPDARHTHNLSLEKRLAAQRIATELLERIVTLIDLGLGYLALERSTPTLSS
GELQRLRLATQLNSQLFGVIYVLDEPSAGLHPADSEALFQALQRLKASGNSVFVVEHDLD
TMRRADWLIDVGPDAGEQGGKILYSGPPAGLRQVPESRTRAYLFAQDSAAGRTPRTPKDW
LRLEGITRNNLDNLSAAFPLGCFSAVTGISGSGKSSLVSQALLDLVGGHLGQASHNAEAD
EQSLEDEPLQTSGGHVTAGLESVKRLVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATP
QAQELGFDAGQFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPTCHGVRYNPQTLEVN
WQGLNIAQVLQLTVNQALEVFAEQASAKRSLQVLQDIGLGYLRLGQPATELSGGEAQRIK
LATELQRKARGATLYVLDEPTNGLHPQDVDRLLVQLNRLVDEGHSVVVVEHDMRVVAQSD
WVIDIGPGAGNQGGKVVVCGAPAKVAKCQESRTAAFLGRVLQPGG
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgcccccacgctccggtcccgcctccgcttcgccattgcctgaagacaccggtttcgtc
cgggtgcgtggcgcccgcgagcacaacctcaagaatgtcgacgtcgacatccctcgcgat
gccctggtggtattcactggcgtgtcggggtcgggcaagtcgtcgctggccttttccacg
ctttatgccgaagcccagcgccgttatttcgagtcagtcgcgccttatgcccggcgcctg
atcgaccaggtgggcgtgccggacgtggacagtatcgaaggtctgccgccagcggtggcc
ttgcaacagcagcgcggcacgcccagcgcgcgatcctcggtgggcagcgtcaccaccttg
tcgagcctgatccgcatgctctactcccgagcgggtagctacccggccgaccaaccgatg
ctgtacgccgaggatttctcgcccaacacgcctcagggtgcctgccagcagtgccacggc
ctgggccgggtctatgaagtgaccgaagcgtccatggtgccggacccttcgttgaccatc
cgcgaacgcgccgtggcggcctggcccatggcatggcagggccagaacctgcgagacatc
ctggtaaccctgggttatgacgtcgacgttccttggcgcgacctgcccaaaaaacagcgt
gactggattctcttcaccgaagagacccccactgtcccggtgtacgccgggctcaccccg
gcccagacccgcgcagccctcaagcgcaaactcgagcccagctatcaaggcacgttcagc
ggcgcccgacgctacctgctgcacacgttcatgcactcccaaagcgcccagatgcgcaaa
cgcgtggcgcaatacatgcgcgccagcccttgcccggtgtgcgaaggtaaacgcctcaag
cgccaggcactgacggtgacctttgccggcctggacatcgccgaactgtcccacctgccg
ttgctggaactggccgaggtgctcaagggcgttgccgcccccgattatctggcgcaagcc
gaggaaccgggaacaaccctcacccaccagcaaacccgcgaggcccgcgagcaacgcgcc
gctcggggtgagaatccccatgccggcgggcctgatgcacgccacacccacaatctgtcc
ctggaaaaacgcctggccgcccaacgcatcgccactgaattgctggagcgcatcgtcacc
ttgatcgacctgggcctcggctacctggccctggagcgcagcacaccgacgctgtcttcc
ggcgagctgcaacgcctgcgcctggcaacccagctcaactcccagctgttcggcgtgatc
tatgtgctggatgaaccctctgccggcctgcacccggccgacagcgaagcgctgttccag
gccctgcaacgcctcaaggcctcgggtaattcggtgtttgtggtcgaacacgacctggac
accatgcgccgcgccgactggctcatcgacgtcggccccgacgcgggggaacaaggcgga
aaaatcctctacagcggcccacccgcgggcctgcggcaggtgccggagtcacgcacccgc
gcctacctgtttgcccaggacagcgctgcggggcgtacgcctcgaacacccaaggattgg
ctacgcctggaaggcatcacccgcaacaatctcgacaacctcagcgccgcctttcccttg
ggttgcttcagcgccgtgaccggcatttccggctcgggtaaatccagcctcgtcagccag
gccctgctggacctggtgggtggccatctgggccaggccagccacaacgccgaagccgac
gaacaaagcctggaagatgaaccgctgcaaaccagcggtggccacgtcaccgccggactc
gagtcggtcaagcggctggtccaggtggaccagaaacccatcggtcgcaccccgcgctcc
aacctcgccacctacaccgggctgttcgatcacgtacgtaaattgttcgccgccacgcct
caggcgcaggaactgggtttcgatgcgggacagttctccttcaatgtcgccaaaggccgt
tgcgaaacctgcgagggcgagggcttcgtcagcgtcgagctgttgttcatgcccagcgtg
tatgcaccctgccccacgtgccacggggttcgctacaacccccagacccttgaagtgaac
tggcaggggctgaatatcgctcaggtgttgcaactgaccgtgaaccaggcgcttgaggtg
tttgccgagcaggcgtcggcaaagcgctcactgcaagtgctgcaggatatcgggctgggt
tatctgcgcctgggtcaaccggccacggaactgtccggcggcgaggcccagcgcatcaaa
ctggccaccgagctgcaacgcaaagcccggggcgccactttgtacgtgctggatgagcca
accaacggcttacatccccaggacgtggatcgcttgctggtgcaattaaatcgcctggtg
gatgaaggccacagcgtggttgtggtggagcatgatatgcgcgtggtggcgcagagtgat
tgggtcatcgacatcggcccgggcgctgggaaccagggcgggaaagtcgtggtatgcggg
gctccggcgaaggtcgcgaaatgccaggaaagtcgaacggcggcctttctgggcagggtg
ctgcagcctggaggttga

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