Pseudomonas rhizophila: CRX69_22180
Help
Entry
CRX69_22180 CDS
T09779
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz00071
Fatty acid degradation
prhz00280
Valine, leucine and isoleucine degradation
prhz00310
Lysine degradation
prhz00362
Benzoate degradation
prhz00380
Tryptophan metabolism
prhz00410
beta-Alanine metabolism
prhz00640
Propanoate metabolism
prhz00650
Butanoate metabolism
prhz00907
Pinene, camphor and geraniol degradation
prhz00930
Caprolactam degradation
prhz01100
Metabolic pathways
prhz01110
Biosynthesis of secondary metabolites
prhz01120
Microbial metabolism in diverse environments
prhz01200
Carbon metabolism
prhz01212
Fatty acid metabolism
Module
prhz_M00087
beta-Oxidation
prhz_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CRX69_22180 (fadB)
00650 Butanoate metabolism
CRX69_22180 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CRX69_22180 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CRX69_22180 (fadB)
00310 Lysine degradation
CRX69_22180 (fadB)
00380 Tryptophan metabolism
CRX69_22180 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CRX69_22180 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CRX69_22180 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CRX69_22180 (fadB)
00930 Caprolactam degradation
CRX69_22180 (fadB)
Enzymes [BR:
prhz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CRX69_22180 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CRX69_22180 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CRX69_22180 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CRX69_22180 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AVU77747
LinkDB
All DBs
Position
complement(4881697..4883844)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSSTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVEPGKLQEAALETIKRAISGEFGYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEQAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgatctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaactg
cgtcaggctgtggacactatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtcttcatcgtcggcgccgacatcaccgaattcgtcgataacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagcgaaccgtatttttagcgacttcgaa
gacctcaacgtaccgaccgtcgcggccatcaatggcatcgccctgggtggcggccttgag
atgtgcctggcagcggattaccgcgtcatgtccagcacggccaagatcggcctgccggaa
gtcaagctgggcatctacccaggctttggcggtaccgtgcgtctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcactg
aaagtcggcgccgtggatgccgtggtcgagccaggcaaactccaggaagcggccctcgaa
acgatcaagcgcgccatcagtggcgagttcggctacaaggccaagcgccagccgaagctg
gaaaagctcaagctcaatgccatcgaacaaatgatggctttcgaaaccgccaagggtttc
gtcgcaggtcaagcaggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggccctggaagtcgaagccgccggcttcgtcaaa
ctggccaagacctcggctgcacaaagcctgatcggtctgttcctcaatgaccaggaactg
aagaaaaaggccaaggcctacgacgaaatcgcccgtgacgtgaagcaggccgccgtactc
ggcgccggtatcatgggtggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgagcaaggcctggccgaggcggccaagctg
ctggttggccgcgtcgataaaggtcgcatgaccgcggcgaagatggccgaagtgctcaac
ggcattcgtccgaccttgtcttacggcgatttcggccatgtcgacctggtggtcgaagcc
gttgtcgagaacccgaaggtcaagcaggcggtactggctgaagtcgaagacaaggtcaaa
gaggacaccatcctcgcttcgaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacaagcgatcgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggctttttggtc
aaccgcgttctgttcccgtacttcggcggtttcgccaagctggtcagcgctggtgtggac
tttgtgcgcatcgacaagatcatggaaaaattcggctggccgatgggccctgcgtacctg
atggacgtggtcggcatcgataccggccaccatggtcgcgatgtcatggctgaaggcttc
ccggaccgcatgaaagacgaccgccggtcggccgtcgacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggtaagcag
aagaaagtggccgactcgtcggtgctggaagtgctcaagccgatcgtctacgagcagcgc
gaagtcaccgacgaggacatcatcaactggatgatgatcccgctgtgccttgaaaccgtg
cgttgcctggaagacggcattgttgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtg
gccgagttcgttgccctggcagaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
DBGET
integrated database retrieval system
