Pseudomonas rhizophila: CRX69_23015
Help
Entry
CRX69_23015 CDS
T09779
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CRX69_23015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
prhz02022
]
CRX69_23015
02035 Bacterial motility proteins [BR:
prhz02035
]
CRX69_23015
Two-component system [BR:
prhz02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CRX69_23015
Bacterial motility proteins [BR:
prhz02035
]
Pilus system
Twitching motility proteins
CRX69_23015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
HTH_50
HTH_30
AAA_19
AAA
Pre_tape_measure
AAA_16
VpsR
Latarcin
Motif
Other DBs
NCBI-ProteinID:
AVU77899
UniProt:
A0ABM6UK60
LinkDB
All DBs
Position
5058547..5059893
Genome browser
AA seq
448 aa
AA seq
DB search
MTTRSRQRILIVDDEPDIRELLDITLGRMKLDTRSAENLAQARALLAEDTFDLCLTDMRL
PDGTGLELVQHIQQRYPQLPVAMITAYGSLETAIDALKAGAFDFLTKPVDLGRLRELVTS
ALRLPSVAIPAASIERCLLGDSPPMHNVRKQIEKLARSQAPVYISGESGCGKELVARLIH
EQGPRSAQRFVPVNCGAIPTELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRAVGGQQEEVVDVRILCATHKDLDAEVTAGRFRQDLYYRLN
VIELRVPPLRERREDIESLANHTLQRLAANTGSPAVKLHPQALDALRNYRFPGNVRELEN
MLERAYTLCEHQLIEAHDLRLAEGISTTDAGSPDLMRVDNLEDYLEDVERKLILQALEET
RWNRTAAAQRLKLSFRSMRYRLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgactacgcgctcacggcaacgaatcctgatcgtcgatgacgaaccggacatccgcgaa
ctcctggacattaccctgggccggatgaaactcgacacccgcagcgccgagaaccttgcc
caggcccgggccctgctggctgaagacacctttgacctgtgcctgaccgacatgcgcctg
cccgacggcactggcctggagctggtgcaacatatccagcaacgctacccgcaattgccc
gtggcaatgatcaccgcctacgggagcctggaaaccgccatcgacgccctcaaggccggc
gccttcgacttcctgaccaaaccggtcgacctgggtcggctgcgtgagctggtaaccagc
gcattacgcctgccgtcggtcgccatcccggcggcgtccatcgagcgctgtctgctgggc
gattccccgccgatgcacaacgtccgcaaacagatcgaaaaactcgctcgcagtcaggcg
ccggtctacatcagcggggaatcgggttgcggcaaggaactggtcgcccggttgatccat
gagcaaggcccgcgttccgcccagcgttttgtgccggtcaactgtggggcgattcccacg
gagctgatggaaagcgagtttttcggccatcgaaaaggcagcttcagcggcgccatcgaa
gacaaaccgggactgttccaggccgctcacggcgggaccttgttccttgacgaagtggcc
gacctgcccctggcgatgcaagtcaaattgctgcgggccatccaggaaaaagccgtgcgg
gccgttggtggccagcaggaagaagtggtggatgtacgaattctttgcgccacccacaag
gacctggacgccgaagtcaccgccgggcgctttcgccaggacctgtactatcgactcaac
gtcatcgaactgcgcgtcccgccgctgcgcgaacgccgcgaagacatcgaatcgctcgcc
aatcataccctccagcgcctggccgccaacaccggcagccccgcggtcaagctccatccc
caagctctggacgcccttcgaaactaccgcttcccgggcaatgttcgggaactggaaaac
atgctcgaacgcgcctacaccctttgcgagcaccagttgatcgaagcccacgacctgcgc
ctggccgagggcatcagcaccaccgacgcaggcagccccgacctgatgcgggtcgataac
ctggaagactatctggaggacgtcgaacgcaaactcatcctccaggctttggaggaaacc
cgctggaaccgcacggcggcggcccaacggttgaagttgtcgtttcggtcgatgcggtat
cggttgaagaagttggggttggattga
DBGET
integrated database retrieval system
