Pseudomonas rhizophila: CRX69_23575
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Entry
CRX69_23575 CDS
T09779
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
prhz
Pseudomonas rhizophila
Pathway
prhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CRX69_23575 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prhz03400
]
CRX69_23575 (recC)
Enzymes [BR:
prhz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CRX69_23575 (recC)
DNA repair and recombination proteins [BR:
prhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CRX69_23575 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AVU78007
UniProt:
A0ABN5K6U5
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All DBs
Position
complement(5181311..5184763)
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AA seq
1150 aa
AA seq
DB search
MPDATSLSPAFMVVHGNRLDELRSLVISLMRRYPLGPLENEIALVQSNGIAQWLKLALAE
DPEDDDTGGCGIAAAIDVQLPGSFMWQLYRTVLGRDEIPAKSLLDKAPLTWRLMRLLPQL
IEQPHFEPLRRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGRHQTRNVRGE
IKPLAPENCWQAELWRALLMDVGEQGMAQSRAGVHQRYIERINSLEVAPRNLPARVIVFG
ISSLPAQVLEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKAGMPVVL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRSVFRDGRIDLFSEGNPTTLLGQL
QDDILELRPLNETREHWPAVDTEQDGSIRFHVAHSAQREVEILHDQLLARFSADPSLRPR
DIIVMVPDIDSYAPHIRAVFGQLERTDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFGIDEADLPTLHRWIEGAGIRWGMSAEHRAGLGLPAELEQNS
WRFGLRRMLLGYAVGSAGAYDGIEPYDEIGGLDAALIGPLVALLDALQVAHQELTRPASP
QEWGSRLHDLMQLFFQASNEHDDYLLAQLEDLRETWLETCESVALQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSAREKLYISWVGRSIRDNSDRPASVLVGQLRDHLASGWRLAD
DRGDLLEALTQEHPLQPFSARYFHQGSALFSYASEWRMLHGAHEHAAQSQVLEPYVQEEP
LGLGQLQDFLRNPVRHFFSQRLKIFFEAIEAPLADDEPFVLDALQRYSLSDSLLEAALVR
LDQPDLALATHAKRLQNSGLLPMAGFGECMQRELIEPLPDLLQRYQQLLALWPTPLTSAL
PVSLQLHGVSVEGWLSGLHQRADGAVLTISAIPNGIGSPKTRKWHRLIRPWVNHLVACAN
GFSMTTALVASDDSLLLAPFEEPVARRLLGDLLQAWQAGMRQPLPVAVKTAFAWLGQSDP
AKADAAARKAYEGDGQNSEGERRESPALARQFADFDALTADETFPDWCDALYRPLLEAPW
RSLAGEEVGS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgacgtccttaagccctgctttcatggtggtccacgggaatcgcctggat
gagttgcgcagcctggtgatcagcttgatgcggcgctatccgctggggcctcttgaaaat
gaaatcgcgctggttcaaagcaatggcatcgcccaatggttgaagctggcattggctgag
gatccggaagatgacgataccggtggctgcggtatcgccgccgccattgatgtgcagttg
cccggcagtttcatgtggcaactctatcgaacggtcctgggacgtgacgaaattccggcc
aagtcgttgcttgataaggctccacttacatggcggctgatgcgccttctgccacagttg
atcgagcagccccatttcgagcccctgcggcgtttccttacccacgataccgacttgcgc
aagcgttatcagttgtccgagcgtcttgccgatctgtttgaccaatatcaggtgtaccgg
gcggattggctggaggactgggctgaaggtcggcaccagacaagaaatgtccggggcgaa
atcaagccgctcgcgccagaaaactgttggcaggccgaactgtggcgggcccttttgatg
gatgtaggggagcaaggcatggcccaaagccgtgctggggttcatcaacggtacatcgag
cgtatcaacagtttggaagtggctcccaggaacctgcccgcgcgggtgatagtgttcggc
atttcttctctgccggcccaagtccttgaagcacttgccggtctgtcacggtttagccag
gttctgctgtgcgttcataacccatgtcgccaccattgggcggacatcgtcgcggacaag
gacctgctacgccaccaatacaaacgccaggcccgcaaggccggaatgcccgttgtcctc
gacccgcagaccttgcaccagcatgctcatccattattggctgcgtggggcaagcagggg
cgtgactatatcaacctgctcgacagctacgacgatcccaacagttatcgctcggtattt
cgcgatggacggatcgacctgttcagcgaggggaatcccacgacccttctcggccaactg
caggatgacattctcgagctgcgccccttgaacgaaacccgggaacactggccagcggtg
gatacggagcaggacgggtctatccgtttccatgtagcccacagtgctcagcgcgaggtt
gaaatcctccacgatcagctgctggcccgctttagtgcggatccgagcctgcgcccccgg
gatatcatcgtcatggtcccggacatcgacagctacgcaccgcatatacgcgctgtgttc
ggtcagcttgaaagaactgatccccgtttcattcctttcaccctcactgatcagggccag
cgtggacgtgatccgttattgatcgctgtcgaacacttgctcaagctgccggatagccgc
tttccggtcagcgaaatcctcgatctgctcgatgttccggcgttgcgtgagcggttcggt
atcgatgaagctgacttgcctacgctgcaccgctggatcgagggggccggtatccgctgg
ggcatgagtgccgaacatcgtgccggactgggattacccgcggagcttgagcagaacagc
tggcgtttcggtcttcggcgcatgctgctggggtatgccgtcggcagcgcgggcgcttat
gacggcatcgaaccctatgatgaaattggtggcctggatgcggcgttgatcggtcctctg
gttgcgttgctggatgctttgcaagtcgctcatcaggaactcacccggcccgcatcaccg
caagaatggggctcgcgcctgcatgatctgatgcaactgtttttccaggcgagcaacgaa
catgacgactatctgctggcccaactcgaagacttgcgtgaaacctggctggagacctgt
gagtcggttgccctgcaggatgagttgcccctgactgttgtccgtgaggcctggttggca
gggttggatcagggccgactgtcccagcgtttcctggccggagcggtcaacttctgcacc
ctgatgccgatgcgcgcgattcctttcaaactggtgtgtctgctgggtatgaacgacggt
gattacccgcgagcacaaccgcccctggattttgatctcatgggcagcgactatcgcccc
ggggatcgttcccgacgcgaagatgatcgatatctgttattggaggcactgctttcagcc
cgggaaaagctctatatcagttgggtcggacgcagcatccgcgacaacagcgaccgtcct
gcttcagtattggtcggccaactgcgggatcatctcgccagcggttggcggttggcggat
gaccgcggggaccttcttgaggcgttgacccaggaacatccgctgcaaccgttcagtgct
cgttattttcatcaaggcagtgcgttgttcagttacgccagtgaatggcgaatgctccac
ggtgcccacgaacacgccgcccaaagccaggtgctggaaccctatgttcaggaagagccc
ttgggccttgggcaactgcaggactttctgcgcaatcccgtccggcacttcttcagtcaa
cgactcaaaatattcttcgaggccatcgaggcccctttggcagatgacgaacccttcgtt
ctcgatgcgctgcaacgctacagcctgagcgacagcttgctggaggccgccctggttcgc
ctcgatcaaccggatctggcactggccactcatgccaaaagactgcagaacagcggcctg
ttaccgatggccggtttcggtgaatgcatgcaacgtgaattgatcgaacccttgcctgat
ttgctccagcgttaccagcagcttctggcgttatggcccacgccgttgaccagtgccttg
cctgtcagcttgcaattgcatggcgtgagcgtcgagggttggctgagtggcctgcaccag
cgtgcggatggagcggttctcaccatcagcgcgatacccaacggtattggctctcccaag
acccgtaaatggcatcgtctgattcgtccttgggtcaatcatcttgttgcgtgcgctaac
ggcttttcgatgacgacggcactggtggccagtgatgacagcttgctgctggctcctttt
gaagagcccgtggcacgacggttgctcggcgatctattgcaagcctggcaggcgggtatg
cgtcagccgcttcccgtcgcggtgaagaccgccttcgcctggctcggccagagcgatcca
gccaaagccgatgcggctgctcgaaaagcctacgaaggcgacgggcagaactctgagggt
gagcggcgggaaagtccggcgttggcccggcagtttgctgacttcgatgccttgacggcc
gacgagacattccccgactggtgcgatgctctttaccggccactgctcgaagcaccatgg
cgttcattggccggcgaggaggtaggctcatga
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