Paenibacillus riograndensis: PRIO_0316
Help
Entry
PRIO_0316 CDS
T03849
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri00040
Pentose and glucuronate interconversions
pri01100
Metabolic pathways
pri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PRIO_0316
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PRIO_0316
Enzymes [BR:
pri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PRIO_0316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
CQR51569
UniProt:
A0A0E4H7C4
LinkDB
All DBs
Position
I:complement(322997..325186)
Genome browser
AA seq
729 aa
AA seq
DB search
MKNRAAKITGIVLLFSLALSLIAGGWANTTVYAAGLSITGSGGWNETAYVEWSPVSNVQG
YSVYVKPASASDSQYQQLNNELIRRYPSYWRADAVGLAAGSYVMKVEAVLSGGGSASAVS
GPLSVTSYDRAGFAFSASSPYGTGSGAYNENGTLKNGAQVLYITSQNAQTVTLPVKINSS
GAVQTGVGLGGILTLRQKGYDTTPLAIRIIGKVTAADLSGQLNSSGYLEVKGKNNYSQMN
MTIEGIGNDAYAYGWGMLLRYVGNVEVRNLGVMLFPDDGISMDTGNVNVWVHNNDIFYGS
AGSDADQAKGDGSTDLKKGSTYITISYNHYWDSGKASLVGLSEPAEFFVTFHHNWFDHSD
SRHPRIRVASVHVYNNFYDGVSKYGVGVTTGASAFVESNVFRHAKYPMMIALQGTDALGE
GTFSGENGGMIKAYNNTVVDAASLIYANSNAGTAPANTTSFDAYLASSRNESVPSSYKAL
VGGTAYNNFDTSADTGVSASDIDSVSTVEQIVTAEAGRMNGGDFTWAFNDSVDDASYALN
SALMSAIRSYTTQLVSVGGNLSPTGPTPTPIATPTPTATPVPTATPVPTTTSTATPVPTV
TPAPTATPAPTATPTPVPTAGATVHNFTTAGTASSFFNIKGNLSTTKGTVVYNGLTLTQC
LKIESTTSIQFTAANASILTLVFNSEGTKIKVDGTSYPITNGIATVSLAAGAHTITKDST
ANLYYMELD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagagcggccaagataaccggtattgttttattgttttcgcttgcactatct
ttaatagcagggggttgggcaaatacaacggtgtacgctgcgggtctttcgataactggc
agtggaggctggaatgaaaccgcatatgtggaatggtcacctgtaagtaatgtgcagggg
tatagtgtatatgtgaaacctgcaagtgcatcggactcccagtatcaacagcttaacaat
gaattaatccgcagatatccctcttattggagagctgatgctgtagggcttgcagccgga
agttatgtaatgaaagtagaagctgtgctgtcagggggcgggtcggcaagtgctgtttca
ggtccgctatccgtaacgtcatatgaccgggctggattcgctttttccgcaagctcacca
tatggcacaggttcaggcgcttataatgagaacggaaccttgaagaatggtgcgcaagtg
ctgtatatcacctcacagaatgcacagaccgttacgcttcctgtaaaaatcaacagctca
ggtgctgtgcaaacaggcgtgggcctgggcgggattttgacactaagacaaaaaggctat
gatacaactcctctcgccatccggattattggaaaagttacagctgctgacctgagtgga
cagcttaacagcagcgggtatcttgaagtcaaaggtaaaaataattactcgcaaatgaat
atgacgattgaaggaatcgggaacgatgcttacgcctatggttggggaatgctgcttaga
tatgttggtaatgtggaagtaaggaacctgggtgtgatgttattccctgatgatggcatt
tcgatggatacaggcaatgttaatgtatgggtgcataataatgatattttctatggatct
gcaggaagcgatgcggaccaagccaaaggtgatggttccaccgaccttaaaaaaggatca
acgtacattacaatctcgtataaccactactgggattccggaaaagcttctctggtcggt
ttgagcgagccggcagagttttttgtcaccttccaccataactggttcgatcattcggac
tcccgtcatccacgtattcgggtagcctcggttcatgtatataataacttttatgatgga
gtttcgaaatatggtgtcggggttaccacaggagcttcagcttttgtggagtccaatgtc
tttagacatgcaaaatatccaatgatgattgccttacaaggtaccgatgctctaggggag
gggacgttctcaggcgaaaacggaggtatgattaaagcctacaacaatactgttgttgat
gctgcaagtcttatttacgccaactccaatgccggaacagctccggctaatacgacctct
tttgatgcatacttagcttcatcgagaaatgaatccgttccaagctcatacaaagcttta
gtgggcggaacagcatataacaacttcgatacgagcgccgatacgggggttagtgcatct
gacatcgatagcgtaagcactgttgaacagattgttacagcagaagccggacgtatgaat
ggcggagacttcacttgggcatttaatgattccgtggatgacgcatcgtatgcgctgaat
tccgcactgatgtccgcaatccgaagctacaccactcagcttgtatcggtaggcggaaac
ttaagtccaacgggaccgacaccgaccccaatagcaactccaactccaacagcaaccccg
gtgccaacggcgactcctgtaccaacaacgacttcaacggcaacgccagttccgacagtg
acccctgcaccaacggcaactccggcgccgacagcgacaccgactccagtgccgacagcg
ggtgcaactgtccataacttcaccacagccgggacggcaagcagcttcttcaatattaaa
ggcaacctctcaacgaccaagggaactgtggtatataacggtctcaccctaacccaatgc
ttgaaaatcgaaagtacaaccagcattcaattcaccgccgcaaatgcttcaatcttaacc
cttgtgttcaactcagaaggaaccaaaatcaaggtagatggaacaagttatcccataacg
aatggcattgccacggtctcccttgcggcgggtgcgcataccattacaaaggatagtact
gcgaatttgtattatatggagttggattag
DBGET
integrated database retrieval system
