Paenibacillus riograndensis: PRIO_0381
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Entry
PRIO_0381 CDS
T03849
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PRIO_0381 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_0381 (alkA)
Enzymes [BR:
pri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PRIO_0381 (alkA)
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PRIO_0381 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
CQR51634
UniProt:
A0A0E4H660
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All DBs
Position
I:417684..418583
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AA seq
299 aa
AA seq
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MNDLLFELPLPEFFDFGVCLEYLNRSPLECLYRTDQEGVTRYFNLDNQPLLIKLTVPPGN
RMHVTLLHGDIPGPGAAEWLARYIREWFDLDRDLAPFYHLAQADPLLAPLAEQHKGLRIV
GIPDLFEALCWAILGQQVNLAFAYRLKQQLTAAFGGSLEWEGDVYYTFPGPEVFADVQLE
ELCALQLTRSKARTVLDVAALIASGGLSREALLALPSPDAAEQRLLQICGIGPWTSQYVR
MRCLDDTTAFPVGDVGLQNAVKFLTGMDRKPTPAELLKLAEPWRGWEAYATFYLWRALY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttgctttttgagctgccgctgccggagtttttcgatttcggggtctgcctg
gaatacctgaaccgctcgccgcttgaatgcctgtaccggacggatcaggagggagtgacc
cgttatttcaatctggataaccagccgctgcttatcaagctgacagttcctccggggaac
agaatgcacgtaacactgctgcacggggacattcccggtccaggggcggcagaatggctg
gcccgctatatccgggaatggttcgatctggaccgcgatctggcgccattctaccatttg
gcgcaagctgacccgctgctggcaccgcttgctgagcagcataaggggctgcggatcgtc
gggattcccgatctgttcgaggcgctgtgctgggccattctgggccagcaggtaaatctg
gcttttgcctacaggctgaagcagcagctgaccgctgccttcggcggatcactggaatgg
gaaggggatgtctattatacattccctggcccggaggtgttcgcggatgttcagctggag
gagctgtgcgccctgcagctgacccgcagcaaagcgcggacagtgctggacgtggccgcg
cttatagccagcggcggcttaagccgcgaagcgctgctggcgctgccgtccccggacgcc
gccgagcagcgtctgctgcagatctgcggtatcggtccatggacctcgcagtatgtgagg
atgcgctgtcttgatgacactacagccttcccggtgggagatgtcgggctgcagaatgcg
gtcaaattcctgaccggcatggaccggaagcctaccccggcagagctcctgaagctggca
gagccctggcgcggctgggaggcttacgccacgttttatttgtggcgggcgctgtattaa
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