Paenibacillus riograndensis: PRIO_0441
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Entry
PRIO_0441 CDS
T03849
Name
(GenBank) putative ATP-dependent helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03420
Nucleotide excision repair
pri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PRIO_0441
03430 Mismatch repair
PRIO_0441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_0441
Enzymes [BR:
pri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PRIO_0441
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRIO_0441
MMR (mismatch excision repair)
Other MMR factors
PRIO_0441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CQR51694
UniProt:
A0A0E4H7H4
LinkDB
All DBs
Position
I:complement(486519..488846)
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AA seq
775 aa
AA seq
DB search
MNKLLFHNIPLGATGERIPQAKVASARTSREMVKPGDSDAAYFRRLEEGGILLNSPQIAA
VRHHQGPLLTLAGAGSGKTSVLICRTGYLLSVRGISPSQLLLLTFSNKAAAEMRERIALL
PGVRESDAARLQARTFHSFFLYFLRRQGLQQEIFNETRRQHILLKQIMRELGLPKDAYPP
ETLLALLSTCKMNLGEPEKLPETSPAEKEMKAVLLLYEQWKTDNFKIDFDDVLLIAYRML
REKPALLLELQMRFLYVMVDEFQDTNALQYELVKMIAHPQHNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPGARVITLDINYRSGPAIVGLGNGIIRHNMRRRAKTLQAAQGSGRQPRY
LRPQTADEEAEQIVEHILSEVASGARAYSDFALLYRASSSNRALLERLLLRDVPYVDYGE
GQLLYEHWLISPVLDYLRLSLNRRNFAAMENILPTLYLNREKGMNHIRRMEAVQPKQGPL
IHLLSLPGMEDFKSGKLRERLELIRGLIRLTPVQAIRQIRSGFYDYFIEANERHQATLHR
EMLKEMLDELEASAERFDSLPGFLEFIGNVTERNELSRQPGLKEQGNRVALMTIHKSKGL
EFPVVFLIGASEGILPHSSALEGERLKDRKTSPPPGARDSKVIAGNTAGLAALEEERRLA
YVAVTRAREELFISSPARHRGKKAEVSRFMLSAFRSAVPAAPASATVNRIPAAVRHISAS
SSRGKTHTVPIWKCTGGSCPGWTRMKAGGAEDHLSSKPCPLCSSPMEKSMREVPV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttttatttcacaatataccgctcggggctaccggcgaacgcattccgcag
gcgaaggtcgcttctgcccggacaagccgcgaaatggtgaagcccggagactccgatgcg
gcttacttccgcaggctggaggaaggcggtattctgctcaactccccgcagatcgcggcg
gtgcggcatcatcaaggcccattgctgacactggccggggcaggctccggcaaaacctcg
gtactgatctgcagaaccgggtatttgctgtccgtccggggcatctccccaagccagctg
ctgctgctgacgttctccaacaaagcggcggcggagatgcgtgaacggattgccctgctg
ccaggcgtccgcgagagcgatgccgcgcgcctacaggcgcgcacgttccattcttttttt
ctctatttcctgcgccgtcagggtcttcagcaggaaatcttcaatgagacgcgccgccag
cacattctgctgaagcaaattatgcgcgagctgggtctgcctaaggatgcctatccgccg
gaaaccctgcttgctctgctctccacctgcaagatgaatctgggcgagccggagaagctg
ccggaaacctcacccgccgagaaggaaatgaaggcggtcctgctgctgtatgagcaatgg
aagaccgacaatttcaaaatcgacttcgacgatgtgctgctgattgcctaccgcatgctg
cgggagaaacctgcacttttgctggagctgcagatgagatttctgtacgtgatggtcgat
gagtttcaggataccaatgcattgcagtatgagcttgtcaaaatgatcgcccacccgcag
cataatctgatggtggtcggggatgatgatcagacgatctattccttcaacggagcccgc
agcgagttcattctggagttcgagaagctgtatccgggtgcacgggtcatcacgctggat
atcaattaccgttccggccccgcaattgtcggcctcggcaatggcattatccgccacaat
atgcggaggcgggccaaaacgctgcaagcggcccaaggcagcggccgccagccccggtac
ctgcgcccgcagacggcggacgaggaagccgaacaaattgtggagcatatcttgagcgag
gtagccagcggggctagagcatacagtgatttcgccctgctctaccgtgcttccagcagc
aaccgggccctgctggagcggctgctcctccgcgatgtcccctacgtcgattacggagaa
ggccaactgctctacgagcattggctgatctctccggtattggattatctgcgtttgtcg
ctgaaccggcggaacttcgcggcaatggagaatatcctgccgaccctatatctgaaccgg
gaaaagggcatgaaccacatccgccggatggaggccgtccagcccaagcagggcccgctg
atccacctgctgtctctgccgggaatggaggacttcaaaagcgggaaattgcgtgaacgg
ctggagctgatccggggtctgatccggctgacaccggtgcaggcgatccgccagatccgc
tcaggcttctatgactatttcatcgaagccaatgaacggcatcaggccactctccaccgg
gaaatgctgaaagaaatgcttgatgagctggaagcctcggcggaacggttcgacagcctc
ccggggtttctggagttcatcggtaatgtgaccgaacgcaacgagctaagccgccagccg
ggactaaaagaacaggggaaccgggttgccctgatgacaattcataagtcgaaggggctg
gagttcccggttgtttttctgatcggtgcgtcagaaggcatccttccccacagttccgca
ctggaaggtgagcggttaaaggacaggaagacatccccaccaccaggcgcgcgggacagc
aaagtcattgcaggcaataccgctggcctcgctgcacttgaagaggagcggaggctggct
tatgtggccgtgaccagggcccgcgaagagctgttcatcagctccccggcacggcaccgg
ggcaaaaaagcagaagtctccagatttatgctgtccgccttccgttctgcggtgccagcg
gctccggcttctgcaactgttaacagaatcccggcggcagtgcggcacatttccgccagt
tcctccagggggaaaacacacactgttcccatctggaagtgcaccggcggcagctgtccg
ggctggacgcgcatgaaggcagggggagccgaggatcacctgtcctccaagccctgcccg
ctctgcagctctccgatggagaagagcatgcgggaggtccccgtgtga
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