Paenibacillus riograndensis: PRIO_1149
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Entry
PRIO_1149 CDS
T03849
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PRIO_1149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_1149
Enzymes [BR:
pri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
PRIO_1149
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PRIO_1149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CQR53028
UniProt:
A0A0E4H8I3
LinkDB
All DBs
Position
I:1314212..1314730
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AA seq
172 aa
AA seq
DB search
MDEVPDHLDHGLQIVFIGFNPSLRSGEVGHHYANPRNNFWRILERSGLTPRLYDASEDGE
LLRLGLGFTNIVARPTRGAEDITREEYAEGRQILREKLARHRPEIACFVGKGVYTEFSRR
PKADWGFQDGQPPVVDGVREFVAPSSSGLVRMPLPEIVAIYRRLYEYIQEGP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtgccggatcacttggaccacggcttacagattgtttttatcgggttcaat
cccagcctccgttcgggggaagtggggcatcattacgccaatccgcgcaataatttctgg
cgcattctggaacgctccggcctgacgccccgcctctatgatgcctcggaagatggggaa
ctgctccggctaggcttgggattcaccaacatcgtcgcccgcccgacgcggggtgcggag
gatattacccgggaggagtatgccgagggccggcagattctccgggagaagcttgcccgc
caccggccggagatcgcctgctttgtcggcaaaggcgtctatacggaattcagccgccgc
ccgaaggcggactggggctttcaggatggccagccgccggttgtggacggtgtgcgggag
tttgtcgccccctcgtccagcggcctggtccgtatgcccctgccggagatcgtggccatt
taccggaggctgtatgagtatattcaggagggtccctga
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