Paenibacillus riograndensis: PRIO_1254
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Entry
PRIO_1254 CDS
T03849
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRIO_1254 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pri03019
]
PRIO_1254 (groL)
03110 Chaperones and folding catalysts [BR:
pri03110
]
PRIO_1254 (groL)
03029 Mitochondrial biogenesis [BR:
pri03029
]
PRIO_1254 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pri04147
]
PRIO_1254 (groL)
Enzymes [BR:
pri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PRIO_1254 (groL)
Messenger RNA biogenesis [BR:
pri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PRIO_1254 (groL)
Chaperones and folding catalysts [BR:
pri03110
]
Heat shock proteins
HSP60 / Chaperonin
PRIO_1254 (groL)
Mitochondrial biogenesis [BR:
pri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PRIO_1254 (groL)
Exosome [BR:
pri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PRIO_1254 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PRIO_1254 (groL)
Exosomal proteins of breast cancer cells
PRIO_1254 (groL)
Exosomal proteins of colorectal cancer cells
PRIO_1254 (groL)
Exosomal proteins of bladder cancer cells
PRIO_1254 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
CQR53249
UniProt:
A0A0E4H8M0
LinkDB
All DBs
Position
I:1434855..1436483
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AA seq
542 aa
AA seq
DB search
MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGID
KAVKAAVTELQNIAKPIEDSQAIAQVAAISAADDEVGKLIAEAMEKVGKDGVITVEESRG
FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISSTQEILPLLEKIVQ
QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT
EKLGLDLKSTSVEQLGNARQVRVTKENTTIVDGSGDKADINARVSQIRAQLEETTSEFDK
EKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGTALVNV
YNAVAAVDVTGDEKTGVNIVLRALEEPIRTIAANAGQEGSVIVDRLKKESIGIGYNAATG
EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKPSMPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattcagtgaagatgcccgccgcgcaatgctgcgtggggttgat
gctttggcaaatgccgtaaaagttacactcggaccaaaaggccgcaacgtggtgctggag
aagaaattcggcagcccgctgatcactaacgacggtgtaaccatcgccaaagaaattgaa
ctggaagatgcttttgagaacatgggcgcacagctcgtgaaagaagtagctaccaaaacc
aacgatgtagccggtgacggaactacaactgcaactgttctggctcaagcgatgatccgc
gaaggtctgaagaacgtaactgcaggcgcgaacccgatggttatccgcaaagggatcgac
aaagcggttaaagcagctgtaactgaactgcaaaacatcgctaagccaatcgaagattcc
caggcgatcgctcaggtagcggctatctccgctgctgacgacgaagtgggcaagctgatt
gcggaagctatggaaaaagtgggcaaagacggcgttatcaccgttgaagaatcccgcggc
ttcctgactgagcttgaagtggtagaaggtatgcagttcgaccgcggctacatttccccg
tacatgatcacggacacggacaaaatggaagctgttctggagaacccgtacatcctgatc
accgataagaaaatcagcagcacccaggaaatcctgccactgctggagaagatcgttcaa
caggcgcgtccgctcgtaatcatcgctgaagatatcgaaggcgaagctcaagcgatgctg
atcgtgaacaaactgcgcggaaccttcaacgctgtagcggtgaaagctcctggcttcggc
gaccgccgtgaagctatgctgcaggatatcgctgctctgaccggaggccaagtcattact
gagaagctcggtcttgatctgaagagcacttctgtggaacaactgggtaacgcccgtcaa
gtgcgcgtaaccaaagaaaatacaaccatcgtagacggcagcggcgacaaagcggacatc
aatgcacgcgtaagccaaatccgtgcccaattggaagaaaccacttccgagttcgacaaa
gaaaaactgcaggaacgcctggctaagcttgctggcggcgtagccgttgtcaaagtcggc
gctgcaactgaaactgaactgaaagagcgtaaactgcgcatcgaagacgccctgaacgca
acccgcgctgcggttgaagaaggtatcgtatccggtgggggtacagctcttgtgaatgta
tacaacgctgttgcggctgtagacgtaactggcgatgagaagacaggtgtgaacatcgtg
ctgcgcgctctggaagagccaatccgcacgatcgcagctaatgcaggacaagaaggttcc
gttatcgtggaccgtctgaaaaaagaatccatcggcatcggctacaacgctgctaccggt
gaatgggtgaacatgtttgaagccggaatcgttgaccctgccaaggtaacacgctccgcg
ctgcagaacgcagcttccgtagctgcgatgttcctgactaccgaagcggttatcgctgac
aagcctgagcctgaaaaaccaagtatgcctgatatgggcggcatgggtggcatgggcggc
atgatgtaa
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