Paenibacillus riograndensis: PRIO_1564
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Entry
PRIO_1564 CDS
T03849
Symbol
recQ
Name
(GenBank) putative ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRIO_1564 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pri03019
]
PRIO_1564 (recQ)
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_1564 (recQ)
Enzymes [BR:
pri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PRIO_1564 (recQ)
Messenger RNA biogenesis [BR:
pri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PRIO_1564 (recQ)
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PRIO_1564 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
CQR53821
UniProt:
A0A0E4H7S4
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All DBs
Position
I:1772276..1774111
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AA seq
611 aa
AA seq
DB search
MKMQAPTMEQAQAELQKYYGYPDFREGQKKIVMNLLEGRDTLGIMPTGGGKSICYQVPAL
LLPGLTLVISPLISLMKDQVDALTTAGIPAAYINSTLSGKEVNERIRAARRGELKLLYVA
PERLELDWFRLEMAGLSISCVAVDEAHCVSQWGHDFRTSYLAVSPFVDELPERPILAAFT
ATATPEVMEDMVRLLRLRQPGVFMTGLGRDNLAMSVLRGENKREFVLDYTARHSHQPGIV
YAATRKEVDDLYQRLQASGIAAGRYHAGMSDQERAESQEGFLYDDIRVMVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSQCILLFSAQDIMTQKFLIEQNPQDADR
KANEYRKLQQMIDYCYTTRCLRSAQLDYFGEEHGDQPCGICSSCTDERELVDMTVDAQKI
FSCIHRMRERFGVALVSSVLKGSRNQKVLQYGFENLPTHGAMSSRTEKEITESINVLISE
GYLALSEGQYPVVRLQPLAAEVLRGQRQVLQRVARVRSTGGSSGGRDRSRVRDLSPSAVN
ETVFEQLRLIRRELAGREHVPSYIIFNDATLREMSVVCPQTEAEMLRVKGVGEVKYRKYG
KPFLEFFQNEM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcaagcacctaccatggaacaggcgcaggctgaactgcaaaaatattatggc
tatcccgacttccgggagggccagaaaaaaattgtcatgaatctgctggagggccgggat
acgctcgggatcatgccgacgggcggcgggaaatcgatatgttatcaggttccggcattg
ctgctgccgggacttacgctggtcatttccccgctgatttcactgatgaaggatcaggtg
gacgcgctgaccacggccggaattccggctgcatatatcaacagcacgctgagcggcaaa
gaagtgaatgaacgcatccgtgcggcgcgccggggagagctgaagctgctctatgtggcg
cccgagcggctggagctggactggttccgcctggagatggcaggcttgtccatctcctgt
gtcgcggtggatgaagcccactgtgtctcccagtgggggcatgatttccggacgagctat
ctggcggtttccccttttgtggacgagctgccggaacggccgattcttgccgcctttacc
gccacagctacaccagaggttatggaggatatggtccggctgctgcggcttcgccagccg
ggcgtattcatgaccggactgggccgggataatctggccatgtcggtgctgcgcggggag
aataaacgcgagttcgtgctggattatacggcgcggcactcccatcagccgggcattgtc
tatgccgccacccgcaaagaggtggatgatctgtatcagcggctgcaggcttccggcatc
gcagccggacgttatcatgcagggatgagcgaccaggagcgtgcggagagccaggaaggt
tttctctatgacgatatccgtgtcatggttgccaccaacgctttcgggatggggatcgac
aagtcgaatgtccgttacgtcatccattacaatatgcccaaaaatatggaagcctacgta
caggaagcgggccgtgccgggcgggacggagagcccagccagtgtatcctgctcttcagc
gcgcaggatattatgacgcagaagttcctgatcgagcagaatccgcaggacgcggaccgc
aaggccaatgaataccgcaagcttcagcagatgatcgattactgctatacgacccgctgt
ctgcgcagcgcccagctggattattttggcgaggagcacggggaccagccatgcgggatc
tgcagctcgtgtacagatgaacgcgagctggtggatatgacagtggatgcccagaagata
ttctcctgcatccaccgtatgcgtgaacgctttggcgtcgcgctggtatcctctgtcctc
aaaggctcgcgcaaccagaaggtgctgcagtacggcttcgagaatctgcctacccacggg
gcgatgtccagccgcaccgagaaggagattaccgagagcatcaatgtgctgatctcggaa
gggtatctggccttatcggaaggccagtatcctgtggtgcggcttcagccgctggccgcc
gaagtgctgcgcggccagcggcaggtcctgcagcgggtggcccgggtgcgcagcaccgga
ggcagctccggcgggcgggaccgcagccgcgtgcgcgatctgtcgccatcggcggtgaat
gagacggtgttcgagcagctgcgcctgatccgccgcgagctggcggggcgcgagcatgtg
ccgtcctacattattttcaatgatgcgaccctgcgcgagatgagcgtggtttgcccgcag
actgaagcggaaatgctgagagtcaaaggggtcggtgaagtgaaataccgtaaatacggc
aagccgttcctggaattttttcaaaatgaaatgtaa
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