Paenibacillus riograndensis: PRIO_2170
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Entry
PRIO_2170 CDS
T03849
Name
(GenBank) conserved repeat domain protein
KO
K20276
large repetitive protein
Organism
pri
Paenibacillus riograndensis
Pathway
pri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PRIO_2170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
DUF7507
bMG10
DUF7619
Collagen_bind
HYDIN_VesB_CFA65-like_Ig
CARDB
GramPos_pilinBB
NPCBM_assoc
Motif
Other DBs
NCBI-ProteinID:
CQR54579
UniProt:
A0A0E4H8K3
LinkDB
All DBs
Position
I:complement(2658997..2665743)
Genome browser
AA seq
2248 aa
AA seq
DB search
MNAFLHKEVKIIPLVVRATINATGAITFTGNTLGLSRSDTTGVPGTQDSIGAFATVNTAS
VFGTYPAGTTSLYQNNSSSAILTIPSGSTVLYAELIWGGSYINGSVNLSSAINNPVSFTT
PAGTTSSVSPDSATSNSVDLGNGALAYVRSANVTSIIQAGGAGTYTTGGVVGTIVITGDS
TANHAGWTLGVIYQNPSLPFRNMSLRAGAVLVQASSAPVATTITGFATPVSGALGGRILF
SAQEGDANRSGDQALFGPTSNTQVALSGPNNFANNFFASQINNDTGALNTTGTFGTRNQT
NGSPGTNIIGGRQGWDITNVDVSARLVNNQSSALLTLTTSGDAYVVNGNALQIDINAPKI
SLTKGSNVAGTVVGDTVTYTVTVSNTGTASATSAVLSDTLPAGLTFVNRSVVVAGVYRPS
YDITAGVPLGTLTLGTSATVTYQATVTSLPAPQTVANTANVAFTFQSVAGGPIVTGVIPS
NTDTLPVYSPVLGIVKSASTANATVGDQITYTLQITNTGNIGAATVITDNIPAGSSYVPG
SFTVNGTPTAGNPSTGISIGTVPAGGSTTVQFQVQVNSLPSPPQLVDQATAAYTFLVPDG
RTLAGTAASNTLTIPVALPNVAVVKSAGFTDAAVGDILLYTSVISNNGIAPVTNVVLSDP
VPAGSSFVPESVSVAGAARPSADPATGITVGTVAAGTSVTVTFQVNVTSVPSPAQLSNRS
SASYSSGVFTGISQSNTTVTPVYQPVITIVKSASTASATVGGNVLYTLRVQNTGNLAAAV
VLSDNIPAGSAFVAGSVTVNGVARPSDSPTGGIALGAVAAGAAVTVTFLTAVQSLPSPPV
LNNQGSSSYTYQLPSGRSLSGASLSNTVSLPVSAPGITLLKNASLASMAVGENLTYTVAV
SNPSGVSVNNVILSDPVPAGASFVAGSVTVNGASLPSANPGAGISLGTIAAGATSTVAFQ
VNAALLPNPAVFTNKASASFTAGAFSGTALSNTVSTSVYIPVINLVKSANAAQASVGSSL
SFTILVSNTGNIAAVLNLTDALPPQAVFETNSVSIGGTPLPGYSPAAGIPVGPLAPGDSV
PVSFLVTVTALPPNQQLLNSAAASFTFTLPDGRQLGGNAASNTLAVPVSAPNVSIVKSVN
AIDAVTGDILTFTSVLTNNSIAAVSHIILSDPLPENAAFIPGTVIVGGVSQPLSVPSAGI
PIGSLGPEASVAVTFEVRITMPIPSQINNQSTVSFTSGVFSGSSSSNITSTPVIQPQISL
VKSANALNATVGDTVIYTVAVSNAGNLAANVTLTDNIPAGTVFDPNSVIVGGFPQPGTAP
DTGITVGTVAPGASIPVSFTVIIVSLPSPQQLVNQAASTFTYTPPDGRLLTGTAVSNTVT
VAVSAPNVAVVKSTTATAAALGDTIPFSVNITNTDAEPVNSVQLSDPTPPGTTFVTGSVS
VNGVPFTNANPATGVSVGTIAPGASANVTYNVTVTSAPASAAINNQATVTYTSGVAFSGS
TISNTVSVPFYQPVLSAVKSASTANATVGDTVTYTLTVSNTGNYPAALTVKDTIPAGTAF
QPNSVLINGLPLPQADPAAGIAAGTIAAGATVAVVFSVVITSLPSPQLLVNQGTAAYSFT
LPDGRTLNGSVLSNTVTIPVTNPNLAVVKTTATTATTLGDTIVYSVTLTNNGIAAVNNVV
FTDALPSGTAFVPGSVLVNGVARPAASPSTGITIGSIAPGASVTVAFSVTVNSLPGSGLL
NNQSSVSFTSGALSSVAFSNIVTTPVYQPVIGAAKSASTVKATVGDTIIYTVNVSNTGNY
PATATLTDTIPAGSTLVPNSVLINGFPSPGANPATGIALGTIAAGTTLAVTFSVVIDTLP
VSQQLSNQATVSFAFTLPDGRTFNQAAVSNINQISVSAPNVQVVKSSPATDAVIGDTVTY
SITVTNNGIEAITNAVLSDPVPAGASFASSSVVVDGTPLPGANPANGIALGTIAPGASSL
VTFSILVNALPASGTLSNQASVSFTSGAFSGASYSNTFVTPVYQPFINIVKGADTANATV
GDTVTYSLKVTNTGNLAANVTITDSIPAGAVFIPNSVLVNGVPQPGADPASGLNIGTVAP
GATITVTITLQVTVASLPSPQQLVNQAAATFTFSPPDGRLLSGSSESNVLVIPVSSPDVT
AVKSTPAVDAVVGDIITYTIAVTNNGIESVNNVVLVDPIPAGSQFVAGSVTVDGVPRTGA
NPAAGIVIGTITPGDSVTVTFQVQVIAV
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattccttcataaggaggtgaaaattattcctctagtcgttcgggctactatt
aacgccacgggagctatcacgttcacaggcaatacgctgggactgagccgctcagacaca
acgggcgttcccggaacacaggacagtatcggagcattcgctacagtaaatacagcctcc
gtattcggaacctatccggcgggaacgacaagcctgtaccagaacaacagctcttcggcg
atactgacaatcccctcaggaagtacagtgctgtatgccgagctgatctggggcggctcc
tatatcaacggttctgtcaatctgagttcagccatcaacaatccggtctccttcacaacc
ccggccggaactacttcaagtgtgtcgccggattcagctaccagcaattcagtcgatctg
ggaaacggcgcgttagcctacgtccgctcagcgaatgtaaccagcattattcaagccggg
ggagccgggacgtacacgacgggcggtgtggtcggcactattgttattaccggcgattcc
acagccaatcatgcaggctggacgctgggcgttatctaccagaacccgtctcttcccttc
cgcaatatgtcacttcgggcaggtgccgtgctggtgcaagccagttcagcgcctgtagcc
acaaccattacaggctttgctaccccggtatctggagcgctgggcggccgcattctgttc
agcgcacaggaaggtgacgccaaccgttcaggagatcaggcgctgttcggtccgacatcg
aatacccaggttgcgttgtccggtcccaacaactttgccaataacttttttgcttcccag
atcaacaatgataccggcgcgctcaataccaccggcaccttcggaacccgcaaccagacc
aatggcagtcccggaaccaatatcatcggcggacggcagggctgggatattaccaatgtg
gatgtctcggcgagacttgtgaacaaccagtcttccgcactgctgaccttaacgacctcc
ggcgatgcttatgtggtcaacggaaatgcgctgcaaattgatatcaacgcccctaagatc
tccttgaccaagggctctaatgtggccgggacggtcgtcggtgataccgtgacctatacc
gtaacagtcagcaatacaggcacggccagcgcgaccagcgccgtattgtcggacaccttg
ccggcagggttaacttttgtgaacagaagtgttgtagtagccggtgtataccggccttcg
tatgatattacggcaggcgttcctttggggactttgacgctcggcacctctgcaacagtt
acatatcaagccacagtcacttcattgccggctccgcagactgtagcgaatacagccaat
gtcgcatttacgttccagagcgtggcgggcggacccattgtgaccggtgttattccatcc
aacacagacacgctgccggtatattcccctgttctgggcatcgtcaaaagcgccagcacg
gccaatgctacagtaggcgatcaaatcacttatacactgcaaattaccaatacaggcaac
attggagccgctactgtgatcaccgacaatattcctgccggaagctcatatgttccgggc
agcttcaccgtaaacggcacgcctacagccggcaatccttccactggcatctctatcggg
actgtgcccgcgggaggaagcaccacggttcagttccaggtacaagtgaacagcctgcct
tcacctccgcagcttgtagatcaggccactgccgcatacactttcctggtgccggacggc
cgcactttagccggtacagccgcttccaacacattgaccataccggtggcactgccgaat
gtagctgttgtaaaaagcgcggggttcaccgatgctgccgtaggggacattctgttgtat
acctcagtcatcagcaataacggcattgctcccgtcaccaatgtcgttctgtccgatccc
gttcccgccgggagcagctttgtgccggagagtgtcagtgttgcaggcgcagcccgtccg
tccgccgatcctgcgactggaatcactgtggggaccgttgccgcgggtaccagtgtcaca
gttacctttcaggtaaatgtaacctcagtaccctcgcccgcccagctgtccaaccgttca
tcggcctcctacagctccggtgtgttcacgggcatttcgcagtccaatacaacggtaacc
cctgtctatcagccggttatcactattgtcaaaagcgccagcaccgccagcgcaactgta
ggcggcaacgtgctgtatacgctgcgggtgcagaatacaggcaatctggccgccgccgtt
gtcctgagtgacaacatcccggcaggctccgccttcgtagcgggcagcgtcaccgtgaac
ggggttgcccgtccctccgattcgccaacaggagggattgcccttggtgcggtggccgcc
ggagccgctgttaccgttacttttttaacggctgtgcagtccctgccttctccccctgtt
ctgaacaatcagggcagcagcagctatacctatcaattgccgagcggacgttccctttca
ggagcaagcctgtccaatacggtcagcctgccggtgtctgcaccgggcatcaccctgctc
aagaacgccagtctggcaagtatggctgtcggggagaacctgacctacactgtggcagta
tccaatcccagcggcgtttccgtaaataacgtcattttgtccgaccctgttccggcgggc
gcttcgttcgtagcggggtccgtcaccgtgaacggagcctccctgccttccgccaatccg
ggagcagggatttcgcttggaacaatcgcggcgggtgcaacatccaccgtggcctttcag
gtcaatgcagcccttttgcccaatccggccgtctttaccaacaaggccagcgcttctttt
acggcaggcgcattcagtggaaccgctctgtcgaatacggtgagcacctctgtatacatt
cctgttattaatctggtcaaaagcgccaatgccgcacaagcctctgtcggcagctctctg
tccttcaccattctggtcagcaacacaggcaacatcgctgccgttctgaatctgaccgat
gctctgccgccgcaggctgtgttcgaaaccaacagcgtcagcatcggcggcactccgctg
ccggggtacagcccggcggccggcattcctgtggggccgctcgcgccgggagacagcgtt
cctgtttcttttctggtcaccgtaacggcgctgcctccgaaccagcagctgctcaactcc
gcagccgcatccttcaccttcacactgcccgatggacggcagcttggaggaaatgcagca
tccaatacgcttgccgttcccgtctctgcgcctaatgtcagcatcgtaaaaagtgtgaac
gccatcgacgccgtcaccggcgacattcttaccttcacctccgtgctgacgaacaacagc
atcgctgctgtaagccacatcattctcagtgatcctctgcctgagaatgcggcctttatt
cccggaaccgtaattgtgggcggcgtctcccagccgctatcagttccgtccgccggcata
ccaatcggcagcctgggcccagaggcttcagtcgccgtaacattcgaggtgaggataaca
atgccgattccttcacagatcaacaaccagtcaaccgtaagctttacctccggtgtcttc
tccggctcttcttcttccaatatcacttccacaccggtgatccagccgcagatttccctg
gtcaaaagtgcaaatgctctcaacgcaaccgtcggcgataccgtcatttacacggtagca
gtcagcaatgccggcaatcttgccgcaaatgtaaccctgacggacaatattccggcaggc
actgtctttgatcccaacagtgttattgtcggcggatttccccagccgggaacagcgccg
gataccggcattactgtaggtacggtcgctccaggggccagtattccggtcagcttcacg
gtcatcattgtatccttgccttcgccgcagcagcttgtcaatcaggcggcttccaccttt
acgtatactccgccggacgggagactgcttacaggcacagcggtatccaatactgtaacg
gtcgcggtctccgctccaaatgtcgcggtagtaaaaagcaccacggcgactgcggcagct
cttggggatacgattcccttttccgtaaatataaccaacacagatgcagaacccgtgaac
agtgtgcagctcagtgatccgactccgccgggtacaacctttgtcaccggcagcgtttcg
gtgaacggtgttccttttacgaatgctaaccctgcgaccggtgtatcggttggaaccatt
gcgcccggcgcatcagccaacgttacttacaatgtaacggttacctctgcaccggccagc
gccgcaatcaacaatcaggctacggtgacgtatacctccggtgttgctttttcgggctcg
actatttccaatacggtcagcgttcctttttaccagcctgtgctctctgcggtcaaaagc
gccagtacagccaatgccacagtcggggatactgtaacctataccctgacggtcagcaac
accggcaattatccggcagcgctgaccgtaaaagataccattccggccggcactgcgttc
cagccgaacagtgtcctgatcaacgggctgccactgccccaggctgatccggctgccgga
attgcggcgggaacgattgcggcgggggcaaccgtagcggttgttttctccgtagtcatc
acctcgctgccttcaccgcagctgctcgtcaaccagggaactgcggcgtacagcttcact
ctgccggacgggcggacactgaacggttcggttctttccaatacggtaacgatccctgtc
accaatcccaatctcgctgtagttaaaacaacagcgacaacagcaaccactcttggtgac
acgattgtatattccgtaacgctgacgaataacggtattgccgctgtcaacaatgttgta
tttacggatgctctgccatcaggcacggcgtttgttcccggcagtgtgctggtgaatggc
gttgcccgaccagcggcttcaccgtctacaggaatcacgataggcagcattgcaccggga
gcttcggtaaccgtagccttcagcgtaactgttaattcgctgccgggcagcggtctgctg
aacaatcagtcctctgtgagctttacctccggcgccctctccagcgtcgctttctcgaac
attgtgaccacaccggtctatcagccggttatcggtgcagcgaaaagtgcaagcactgta
aaagcaaccgtcggggataccattatttacacggtgaatgtcagcaataccggcaactat
ccggcgacggctactttaaccgacaccattccagcagggtctacactggttccgaacagc
gtgctgatcaacggctttccctctcccggagccaatccggcaaccggaatcgcccttggc
accatagccgccggcactactctggctgtaaccttctccgtggtgatcgacacgctgccg
gtaagccagcagcttagcaaccaagctacggtgtccttcgccttcaccctgccggacggg
cggacctttaatcaggcggcggtttccaatatcaatcagatttccgtctccgcgccaaat
gtgcaggttgtgaaaagctctccggcaaccgatgccgttatcggagatacggtcacttac
agcattaccgtcaccaacaacggcattgaggcgattaccaacgccgtgctcagcgacccg
gttcccgccggtgcttcctttgccagcagcagcgtcgtcgttgacggcaccccgctgccg
ggtgccaaccctgccaatggtattgctctgggcactatcgcgccgggtgcttcatcactg
gttactttcagtatccttgtgaacgcacttccggcgtccggcaccctgagcaaccaggct
tccgtaagctttacctccggagctttctcgggcgcttcttattccaataccttcgtgact
ccggtctaccagccgttcatcaacatcgtcaaaggtgcggatacggctaacgcaaccgtc
ggggatacggtcacttattccctgaaagtcaccaacaccggcaatctggcggcaaatgtt
actattacagattcgataccggcgggggctgtgtttattccgaacagcgtgctggtcaac
ggcgtgccgcagccgggagccgatccggccagcggactcaatattggaacggtggcaccg
ggagcaaccatcaccgtaaccattaccctgcaggtcacggtcgcctcgctgccttcgccg
cagcagctggtgaatcaggctgccgccacctttacattcagtccgccggatggacgtttg
ctctccggctcctcggagtcgaatgttctggtaatcccggtatcgtctccggatgtcacc
gcagtaaagagcacgcctgccgttgatgctgtagtcggcgacattatcacctacaccatt
gcagtgaccaacaacggaattgagtctgtcaacaacgtggtgctggttgacccgattccg
gcaggcagccagtttgtcgccggcagcgtcaccgtcgatggcgtgccccgtaccggagcc
aaccccgctgcaggcatcgttatcggcaccattaccccgggagattccgttactgtgacc
ttccaggtacaggtaattgccgtatga
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