Paenibacillus riograndensis: PRIO_2935
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Entry
PRIO_2935 CDS
T03849
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PRIO_2935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_2935
Enzymes [BR:
pri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PRIO_2935
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PRIO_2935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Helicase_C_2
PIF1
Cas3-like_C_2
Zn_ribbon_6
Flavi_DEAD
AAA_16
nSTAND_NTPase5
AAA_19
SLFN-g3_helicase
AAA_30
DAP3
AA9
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
CQR55338
UniProt:
A0A0E3WHI3
LinkDB
All DBs
Position
I:3495964..3498495
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AA seq
843 aa
AA seq
DB search
MEIAKVIVDVPVRSTDRPFDYLIPDPLKLWIEVGSRVAVPFGHRTVQGFVVSLESGETGT
VSGMKPIQEVLDLLPPLSPELVELGDWMSQRYACRRISALQAMLPTALKGKAERLITLGD
AADEGNTTADELFPLFLETDLEENRISEFVRRHGEVSMKLLTRTFPQAAETVKFMLRRGV
LAESQSIKDKMGKKKLKAVDLAIGLAAARESLAGFPARSARQKEVLSFLIDMEAMLPMPM
KDILSILQVTAGTVKALEDKGFIEISEIEVYRDPYRGRDFKPSTPLPLTNEQETVYNRIA
ATVDEQRHEVFLLHGVTGSGKTEIYLQCIQRCVDQGRQAVVLVPEIALTPQMVERFKGRF
GSGVAVMHSRLSVGERYDEWRKIREGKASVAVGARSAVFAPFVSLGLIIMDEEHESSYKQ
EENPKYHARDVAVRRAEQAGAAVILGSATPSLESYHAARSQSDIHFSPVLLHMPSRALGN
ELPKVHVTDMREELKEGNRSMFSRRLHAALESRLERGEQTVLLLNRRGFSTFVMCRSCGY
VAGCPDCDISLTYHSRSDNLRCHYCGHAEPAPKLCPECGSEHIRFFGTGTQRVEEELGKL
FPGIRVIRMDVDTTTEKGSHEKLLNQFRDKKADVLLGTQMVAKGLDFPDVTLVGVITADS
ALNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVVVQSYTPEHYSIVHASGHDYHSFVREE
LKHRRELHYPPYCRLILVTLSHEQLPVLLRLAENYALNLQGKARQLRWFGSLDKLSSDAL
DLLGPVASPLPRLKGRYRFQCIIKWRGSIDAIGLARQVAEELEDSVRDTGLQISLDVDPQ
MLM
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagatagccaaggtcattgtcgatgttcctgtgcgcagcactgaccggccgtttgat
tatttgataccagacccgcttaaactatggatcgaggtgggaagccgggtagccgtgccc
tttgggcaccgtacggttcaggggtttgtggtatccctggaatccggggagacaggcaca
gtctccgggatgaagccgatacaggaagtgctggatctgcttcccccgctgtccccggag
ctggtcgagctgggggattggatgagccaaagatacgcctgcagacggatatcggcactt
caggcgatgcttcctacggctctaaaaggcaaggctgaacggctgataacgctcggcgat
gcggcggatgaaggcaacaccaccgctgatgagctgttcccgctgttcctggagacggat
ctggaggaaaaccggatttcagaatttgtcagacgccatggagaagtctccatgaagctg
ctgacccggacctttccccaggcagcggagacggtgaagtttatgctccgccgcggcgta
ttggcggagagccagtcgattaaggacaagatgggcaaaaagaagctcaaggcggttgat
ttggctatagggctcgcagcggcccgcgaatcccttgccggattcccggcgcgttcggcc
cgccaaaaagaagtgctgtctttcctgattgacatggaggcgatgcttccgatgccgatg
aaggatattttatccattctgcaggtcacggcagggacggtaaaggccctggaggacaag
ggttttattgagattagcgagattgaggtataccgtgacccttaccgggggcgtgatttc
aagcccagtacaccgctcccgctgacaaatgagcaggaaactgtatataacagaattgcc
gcaaccgtggatgagcagcggcatgaggtgtttttgctgcatggagttaccggaagcggc
aagacagaaatctatcttcagtgtatccagcgctgcgtggatcaagggcggcaggcggtg
gtgcttgtgcccgagattgctctaacgccgcagatggtcgagcggttcaaaggccgcttt
gggagtggagtcgctgtgatgcacagccggttgtctgtgggcgagcggtatgacgaatgg
cgcaaaatccgtgaaggtaaagcatcggtggctgtaggcgcccgttccgcggtttttgct
ccgttcgtgagtctgggcctcatcatcatggatgaagagcatgaatcctcttataagcag
gaggagaatccgaaataccatgcgcgtgatgttgcggtccgtcgtgcagagcaggctgga
gctgcggtgatccttggctccgctactccttcactggagagctatcatgcggccaggtcg
cagagcgatattcatttctcgccagtcctgctgcacatgccgagccgtgcacttggcaat
gaattgcccaaggtgcatgtgacggatatgcgggaggaactgaaggaagggaaccgttcg
atgttcagccgccggctccatgcggctctggagagccggctggaacgcggggagcagacg
gtgctcctgctgaaccgcagggggttttccacctttgtgatgtgccgcagctgcggttat
gtggcagggtgtcccgactgtgacatctcactgacgtatcacagccgcagcgataatctc
cgctgtcactactgcggccacgccgaaccggcgcctaagctgtgtccggaatgcggaagc
gagcatatccgtttttttggcacaggcacccagcgggttgaagaagagctcggcaagctg
tttcccggcatccgtgttattcgtatggatgtggacacgaccacggagaagggttcacac
gagaagctgctgaaccagttcagggacaaaaaagccgatgtgctgctgggcacgcagatg
gtagccaaagggctggattttccggacgttacgctggtgggagtgattaccgccgattcc
gcgctgaacctgccggactttcgggcggcggaaaaaaccttccagctgctgacgcaggtt
gccggcagagccggacgccatcagctgcccggcgaggtggttgtgcagtcctataccccg
gagcattattccatcgttcatgccagcgggcatgattaccactcttttgtacgggaagag
ctgaagcaccgccgggaattgcattaccctccgtattgccggctgattctagtcacgctt
tctcatgaacagctgccggtgctgctgcgtttggcggagaattacgcgctgaacctgcag
ggcaaggcacggcagctgcgctggttcggcagcctggataagctgtcctccgatgcgctc
gatctgctcggtcctgtcgcatccccgcttccccggctaaaaggccggtaccggttccaa
tgtatcatcaagtggcgcggctccattgatgccatcggactggcccgccaggtggcagaa
gagctggaggattcggttcgtgataccggactgcagatcagtctggatgtagatccgcaa
atgttgatgtaa
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