Paenibacillus riograndensis: PRIO_3832
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Entry
PRIO_3832 CDS
T03849
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PRIO_3832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_3832
Enzymes [BR:
pri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PRIO_3832
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PRIO_3832
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PRIO_3832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Ribosomal_S13
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
CQR56235
UniProt:
A0A0E4HAZ0
LinkDB
All DBs
Position
I:complement(4468998..4469813)
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AA seq
271 aa
AA seq
DB search
MPELPEMENYRKLLSQHLINVPITGVTVNREKTINMETPEFTQALLGARIVFVERRAKHI
LFHLHDGRRLLLHLMLGGLLFYGTEAERPERSTQVELAFGDHILYFMGLRLGYLHLLSVK
EGEAAMGKLGPELLDRRMTPERFAGLLKGRRGALKSLMVNQQVMAGIGNCYADEIAFEAG
LLPTTLVQNLTPEAVARLYDSVRKVLTEATETGGYMEMPFMTGDTVTGSYNDKCKVYDRE
GEPCLRCGGTIVKIELSGRKVFYCPDCQHDE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaaatggagaattaccgaaagctgctcagccagcatcttataaat
gttccgattacgggcgtaaccgtaaaccgggagaaaaccatcaacatggagaccccggaa
ttcacccaagctctccttggcgcacgcattgtatttgtggagcgccgtgccaagcatatc
ctgttccatcttcacgatggccgcaggctgctgctgcatctgatgctgggcggattgctg
ttttacggtacggaggcagagcggcctgagcgctctacacaggttgagcttgcttttgga
gatcatatcctgtatttcatgggattgcgacttggatatcttcatctgctgtccgtcaag
gaaggcgaggcggcaatgggcaagctgggaccggagctgctggaccgccgcatgactcct
gaacgcttcgcgggtctgctgaaagggcgccgtggcgcactgaagagcctgatggtcaac
cagcaggtgatggcggggatcggcaactgttatgcggatgaaattgcttttgaggccggg
ctcctgccgacgacgctggtgcagaacctgacgccggaagcagtggcacggctgtatgac
agtgtccgcaaggtgctgacagaggccactgaaaccggcgggtatatggaaatgccgttc
atgaccggagatacagttaccggttcttataatgataagtgtaaagtgtacgaccgtgaa
ggcgaaccttgcctgcgctgtgggggaacgattgtcaaaatagagctgtccggccgtaaa
gtgttttattgcccggactgccagcatgacgagtag
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