Paenibacillus riograndensis: PRIO_3992
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Entry
PRIO_3992 CDS
T03849
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRIO_3992 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pri03019
]
PRIO_3992 (rhlE)
Enzymes [BR:
pri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PRIO_3992 (rhlE)
Messenger RNA biogenesis [BR:
pri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PRIO_3992 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CQR56395
UniProt:
A0A0E4CXI4
LinkDB
All DBs
Position
I:complement(4651453..4653006)
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AA seq
517 aa
AA seq
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MTFNDLNLIPAILKALSQENYTSPTPIQEESIPAALAGRDVLGCAQTGTGKTAAFSLPII
QLLSQQPSVTGGKRRIRSLILTPTRELALQISENIQAYSKFTNIRSTAIVGGVSQKAQER
ALSQGADILIATPGRLIDLITQKHADLQYVQILVLDEADRMLDMGFIHDVKRIIAKMPSK
KQTLFFSATMPTEISNLIKTLLVNPVKIEITPVSSTVDRIEQSVYLLENGNKQKQLNRLL
QDKSIVSALVFTRTKRGADRVTRDLTRNNITAQAIHGNKSQNDRQNALRNFKSGTTRVLV
ATDIAARGIDIDELSHVINFNLPNIPETYVHRIGRTGRAGMSGVAISLCEAEEIPYLKDI
QKLIGKTIPEVKDHAYPMSESAQALLRDRPVKTPAKPAAKVKSNPARKPKSEWFTQGNRP
GNSSGGGSRNRSGSRPNGEPAQHAAAGTRPGSAPASGARSGAGASGRANGGNGSRAGAGS
RPGSASGRPGERISTGQNSRPGGSASGRPAAKAGRTQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaatgatttgaatttaatcccggcaatccttaaggcgttaagccaagaaaat
tatacatcccccacccccattcaggaggaatccattccagcggctttggctggccgggat
gtccttggctgcgcacagaccggaacaggtaaaacagcagcattttctctgccgattatt
cagctgttaagccagcagccttccgtaacgggcggcaaacgccgcatccgttcgcttatt
cttacccccacaagagagcttgccctgcaaatctcggaaaatattcaggcctacagcaaa
ttcaccaatatccgctcaacagctatagtcggcggtgtgtcacaaaaagctcaggagcgg
gcattaagccagggtgcagacatcctgatcgccacaccaggccggctcatcgacctgatt
acccaaaagcatgccgatttgcaatacgtgcagatccttgtgctggacgaagcggaccgt
atgttagacatgggtttcattcatgatgtaaagcggatcattgccaaaatgccaagcaaa
aaacaaaccttgttcttctcggctacgatgccgacagaaatttcgaatttgatcaaaacg
ctgctggtgaatccggtgaaaatcgagattaccccggtgtcctctactgtggaccgtatt
gaacaatcggtttatctgctggaaaacggcaataagcaaaagcaattgaatcgtctattg
caggacaaatccattgtgtcagcattggtttttacccgcaccaagcggggggctgaccgg
gtgacccgcgatttgacccgcaataatattacggctcaagccattcatggcaacaagtcc
cagaatgaccggcaaaatgcgctgcgaaacttcaaaagcggaaccacccgtgtactcgtt
gctacggacattgccgcgcgcgggattgatattgatgagctgtcgcatgttattaatttc
aacctgccgaacattccggagacctatgttcaccggatcggccgcaccggccgtgccggg
atgagcggagttgccatttccttatgcgaagcagaagagatcccctacctgaaggatatc
cagaagctgatcgggaagacgattcccgaagtaaaggaccacgcctatccaatgtccgag
agtgcccaggcgctgcttagagaccgtccggtcaagacaccggcgaaaccggcggcaaag
gtgaagtccaatccggcgcgcaagccgaagtccgagtggttcacgcagggcaaccgcccg
ggcaacagctctggcggcggcagcaggaaccgttcgggaagcagaccgaacggggaaccg
gcccagcatgcagcggccgggacaagacctggaagtgctcctgccagtggagcacgatct
ggagccggggctagcggcagagccaacggaggaaacggtagcagagctggtgcaggcagc
cgccccggcagcgctagcgggagaccgggggagcggataagcaccgggcagaatagcaga
cctggcggcagcgctagcgggagacctgctgccaaagctggcagaacgcagtaa
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