Paenibacillus riograndensis: PRIO_4026
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Entry
PRIO_4026 CDS
T03849
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pri
Paenibacillus riograndensis
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pri03016
]
PRIO_4026 (truB)
Enzymes [BR:
pri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PRIO_4026 (truB)
Transfer RNA biogenesis [BR:
pri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PRIO_4026 (truB)
Prokaryotic type
PRIO_4026 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CQR56429
UniProt:
A0A0E4HF26
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All DBs
Position
I:complement(4689004..4689918)
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AA seq
304 aa
AA seq
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MSELTGVLAVYKPAGFTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGRATRVVE
YIQELPKEYVATLRLGLSSDTEDLTGTITETVDEVHVTEAEVLAVLKSFQGVISQVPPMY
SAVKVDGKRLYELAREGKTVERKSREVEIYEIEMTGMIWNGNHPDVTFRVLCSKGTYIRT
LCVDIGRALGLPGVMVKLERTMSAGISASHCLTLEQIAEYKEAGTLEAHLIAADEAVSHL
PRHTVMDGKKKAALQGQRLSLRHVAPEVQHNGHFRLYDEQGGFLGIYVLEETGAIAPVKV
FAQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcttacaggtgtgctggctgtctataagcctgctggcttcacttcacatgat
gttgtcgccaaggcccggcgcattctcggcatgaagcggatcggccacacgggaacgctt
gatcctcaagtgaccggtgtcctgcctctttgtcttggacgggcaacgcgtgtcgtggaa
tacatccaggaactgcctaaggaatacgtagccacgctgcgtctcggcttatccagtgat
accgaggatttaaccggaacgattacggaaaccgttgatgaggtgcatgttacggaagcc
gaagtactcgcagtgcttaaatcttttcagggtgtgatttctcaggttccaccgatgtat
tccgctgtcaaggttgacgggaagcgcctctatgagctggcccgggaaggcaaaaccgtt
gagcggaagagccgtgaagtggaaatctatgagattgaaatgaccggcatgatctggaac
ggtaatcatccggatgttacgtttcgtgtgctgtgctccaaaggcacgtacatccgtacc
ctatgcgtggatatcggccgggcgcttggacttcccggtgtcatggtgaagcttgagcgg
acgatgtctgcggggatatcagcaagccattgcctgaccctggaacagatcgctgaatac
aaggaagcaggcaccctggaggcgcatttgattgcggcggacgaggcggtctcccatttg
cccagacatacagtgatggacgggaagaaaaaagcagcgctccaggggcagcgtctgtct
ctccgtcatgtggctcctgaggtacagcacaatgggcattttcggctttatgatgagcag
ggcgggttcctggggatatatgtactggaagaaacgggagccatcgcgcctgtaaaagta
tttgcacaagcttga
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