Paenibacillus riograndensis: PRIO_4485
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Entry
PRIO_4485 CDS
T03849
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
pri
Paenibacillus riograndensis
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pri03032
]
PRIO_4485
03036 Chromosome and associated proteins [BR:
pri03036
]
PRIO_4485
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_4485
DNA replication proteins [BR:
pri03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PRIO_4485
Chromosome and associated proteins [BR:
pri03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PRIO_4485
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PRIO_4485
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CQR56887
UniProt:
A0A0E4HFQ1
LinkDB
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Position
I:complement(5203784..5204056)
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AA seq
90 aa
AA seq
DB search
MNKSDLINVVTEATELPKKDATKAVDAVFEAITGALQNGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPSSKVPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagatttgatcaacgtggtgacagaagcaactgaacttcccaagaaagat
gctactaaagcggtagatgccgttttcgaagcgatcacaggtgctctgcaaaacggagat
aaagttcagctggtaggattcggaaactttgaagtgcgtgaacgttccgcacgcaaaggc
cgcaacccgcagactggtgaagaaatcgaaattccttcgagcaaggtaccggcgttcaaa
ccgggtaaagctctgaaagacggaatcaaatag
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