Paenibacillus riograndensis: PRIO_5142
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Entry
PRIO_5142 CDS
T03849
Symbol
oppD3
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
pri
Paenibacillus riograndensis
Pathway
pri01501
beta-Lactam resistance
pri02010
ABC transporters
pri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PRIO_5142 (oppD3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PRIO_5142 (oppD3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PRIO_5142 (oppD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pri02000
]
PRIO_5142 (oppD3)
Transporters [BR:
pri02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
PRIO_5142 (oppD3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
NACHT
ATP-synt_ab
Sigma54_activat
AAA_16
AAA_22
DUF87
NB-ARC
Mg_chelatase
AAA_7
AAA_29
ABC_ATPase
nSTAND3
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
CQR57541
UniProt:
A0A0E4HCV5
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All DBs
Position
I:complement(5970135..5971130)
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AA seq
331 aa
AA seq
DB search
MEPILQVKDLHVSFFVKGGEVQAVRGMNFEVGKGETVAIVGESGSGKSVTAQSIMRLIPS
PPSKVKKGEIIFQGQNLLDKSMKQMESIRGKDIGMIFQDPMTSLNPTIKVGKQITEVLIK
HQKMSAAEAKERGVEMLKLVGIKNAEARFNQYPHEFSGGMRQRVMIAIALACRPALLIAD
EPTTALDVTIQAQIMEVMQDMQQKLGTSIILITHDLGVVAGMCDRVIVMYAGEVVETGTR
WEIFKNPQHPYTKGLLRSMPRLDQKKGEPLIPIIGTPPDLIKPPVGCPFTARCSEAMHVC
EQIDPGATEFSETHMARCWNLHSMAKEVQFV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaacccattctgcaagtcaaagatctgcatgtttccttttttgtaaaaggcggagaa
gtacaagctgtccgtggcatgaattttgaagtgggcaaaggtgaaacagtagccatcgtc
ggggaatccggcagcggcaaaagtgtgaccgcacaatcgattatgcggctgatcccttcg
cctccttccaaagtgaaaaaaggcgagattatttttcagggacagaatctgctggacaaa
agcatgaagcaaatggaaagtattcgcggcaaagatattggcatgatctttcaagatccg
atgacttctttgaacccaacgatcaaggtgggcaaacagataaccgaagtattgatcaaa
catcagaaaatgtcagcggccgaagcgaaagagcgtggtgttgagatgcttaagctagtt
ggcatcaaaaatgcggaggctcgctttaaccaatatccccacgaattctccggcgggatg
cgccagcgtgtaatgatcgccattgccctggcctgccgcccggccctgctgattgcagat
gagccgacaacagcgcttgatgtgacgattcaggcgcagatcatggaagttatgcaagat
atgcagcaaaaactggggacctccatcattctgattacacatgatctcggcgttgttgcc
ggcatgtgtgaccgggtcatcgtcatgtatgcgggtgaagtggtggaaacgggtaccaga
tgggaaatctttaaaaatccgcagcatccgtataccaaagggttgctgcggtcgatgccg
cgtctggaccaaaagaagggcgagccgctgatcccgatcatcggtactcccccggatctg
atcaaaccgccggtcggctgtccgttcacagcacgctgcagtgaagcgatgcatgtctgc
gaacaaatcgatcccggtgcaacagaattcagcgaaacgcacatggcgcgctgctggaat
ctgcattcgatggccaaggaggtgcagttcgtttga
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