Paenibacillus riograndensis: PRIO_5197
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Entry
PRIO_5197 CDS
T03849
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pri
Paenibacillus riograndensis
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_5197 (sbcD)
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PRIO_5197 (sbcD)
Archaeal homologous recombinant proteins
PRIO_5197 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CQR57596
UniProt:
A0A0E4HGM9
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Position
I:complement(6030287..6031468)
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AA seq
393 aa
AA seq
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MRILHTGDWHLGRTLEGRSRQKEQEQFIDELVEIADAAQADLILMAGDVYDSVNPPAAAE
QLFYDAAARLTADGRPLVVISGNHDQPERVASVSPLVRRQGIALVGMPTSEPVTVHAART
GEVAKIAALPYPSEARLGELLAGDAGEDELRLAYSARVGRLMNLLGREFTPQTVNLAMSH
IYVLGGVESDSERPIQVGGAYTVDPSALSCGAQYTALGHLHRAQRVKGDSMIRYSGSPLA
YSFSEAGQAKSVALIEVAPGGEPSFEEIYLRCGRPLVNWKSSGGLQEVYGWLDEGRDATA
FIDLELRLTEAMSLNDIQRLRKSREGIIHIRPVYPQMEQELEEMARSRMPVQELFRRFYQ
RQTGGAEPEDSLIELFLELAEEERREPAEGEEN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttgcatacgggagactggcatctggggcggacgctggaaggaagaagccgg
cagaaggagcaggagcagttcatcgatgagctggtggagattgccgatgcagcccaggca
gatcttatcttgatggcgggggatgtctatgattccgtgaatccgccggcagcggcggag
cagctgttctacgatgcagccgcccggctgactgcggatggcaggccgcttgtggtcatc
tccggcaatcacgatcagccggagcgtgtcgcgtccgtatccccgcttgtccgcagacaa
ggcattgcactggtaggcatgcctacctccgaaccggtgacggttcatgccgcacgtaca
ggcgaggttgccaaaatcgctgcgctcccttacccttccgaagcacggcttggcgagctc
cttgccggggatgcgggggaagatgagcttcgtcttgcctatagtgcccgggtcggcagg
ctgatgaatctgctgggccgggaattcacgccccagaccgttaatctggcgatgagccat
atctatgtgctgggcggagtggagagtgactccgagcggcctattcaggtcggcggagcg
tatactgtagatccttcagcgttgtcgtgcggtgcacagtatacagcgcttgggcatctg
caccgcgcccagcgcgtaaaaggcgacagcatgatccgttacagcggatcgccgctggcc
tacagcttctccgaagccggccaggcgaagtccgtagcattgatagaggttgcgcccgga
ggcgagccctctttcgaggaaatttatctccgctgcggccgtcctctggtgaactggaag
tcctccggaggcttgcaggaggtctacggctggctggatgaaggccgggacgccacagct
tttattgatctggagctccgcctcacggaagcgatgtcgctgaatgatatccagcggctg
cgcaaatcccgcgaggggattatacatatccgcccggtttatccgcagatggagcaggag
cttgaggagatggcccgctcgcgcatgccggtgcaggagctgttccgcagattttatcag
cggcagaccggcggggcagagcctgaggacagcctgatcgagctgttcctggagctggcg
gaagaagagcggcgcgagcctgcggaaggggaggagaactga
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