Paenibacillus riograndensis: PRIO_5287
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Entry
PRIO_5287 CDS
T03849
Name
(GenBank) uvrd/rep helicase family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri03420
Nucleotide excision repair
pri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PRIO_5287
03430 Mismatch repair
PRIO_5287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_5287
Enzymes [BR:
pri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PRIO_5287
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRIO_5287
MMR (mismatch excision repair)
Other MMR factors
PRIO_5287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
Viral_helicase1
DEAD
AAA_30
PhoH
ResIII
SLFN-g3_helicase
NACHT
nSTAND3
AAA_11
AAA_16
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
CQR57686
UniProt:
A0A0E4CYN3
LinkDB
All DBs
Position
I:complement(6146871..6149057)
Genome browser
AA seq
728 aa
AA seq
DB search
MEDNFQSAYQEEEDRLNSALTEIDTVLERLRGIPVYTGHDYTEQALEVSREQRRKDLAKL
RQEPYFGRLDFQGKDEDGRKALYIGKIGVDREQVSDRPLVIDWRAPVASLFYSFTGGTEP
ASYEAPEGLIEGLVYLKRNVVIRKQILERVADTYNRDSDGPAVSDEFLVYRLGENKDNRL
RDIVSTIQEEQDKIIRAAKNTALIIQGVAGSGKTTVALHRLAFLLYQYKEQVSAEKMIIF
APNRMFLDYISDVLPELGVGNIAQSTFPDWAADVLGVVLPEQNAAETMSYWFEREGGMPE
ITEETPGRFKGSTALMGIIESVIGLLENGAVPAGDFSPWEGSVLHRSMILRWHNEEYAPY
PPAKRKERVMARIHRWIEMELKKSPSAAAMKDRKKKSAAREKAYSAKWPKYDPLTIYKQI
FRAVKVPEDWPAEAPESIPPEVLASTVKELKKGILHEEDLPPLLYIHYLLNGNEGGSGFD
HIVIDEAQDFSPFQIAVLDLYVKGHSFTILGDLSQGIHAYKGVHAWEEMQTLFAPEHTAY
HALTRSYRSTMEIIEFANGILSAGVGSSLLAVPVFRSGNPVRLISYGQPLPASAAGGDRR
IQAVRTALASLSGREYRTLAVLTRSLREAAELYTELAGHFEDIHLIDGSMTEYRGGLSVL
PVYLSKGLEFDAVILADADSDHYGGAAWDAKLMYVGCTRALHELWILHGEGLPPYLQNGE
GTVQGWPE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
ttggaggacaactttcaaagtgcctatcaagaggaagaagacaggctgaacagcgcgctt
acggagattgacacagttcttgagaggctgcgcggcattccggtgtacacagggcatgat
tatacggagcaggcgctggaggtctcaagggaacagcggcgcaaagatcttgccaagctg
cggcaggagccttactttggacggcttgattttcagggcaaggatgaggatgggcgcaag
gcgctctatatcggtaaaatcggtgtagaccgggaacaggtaagcgaccgtccgctggtc
attgactggcgggcaccggtggcgagcctgttctattcgtttactggcggcacggagccg
gcctcctacgaagccccggaggggctgatcgaagggctggtctatttgaagcgcaacgtg
gtaatccgcaagcagatcctggagagggtggcggatacttataaccgcgacagtgacggg
ccggctgtctcggatgaatttctcgtctaccggctgggggagaacaaggacaaccgtctt
cgtgacatcgtctcgacgattcaggaggagcaggacaaaattatccgggcggcgaagaac
accgcgctgattatccagggcgtggcaggcagtgggaaaaccacggtcgcgctgcatcgt
ctggcttttctgctgtatcaatacaaggagcaggtgtcagcggagaaaatgattattttc
gcaccgaaccggatgttcctcgattatatttcggacgtgctgcccgagctgggcgtcggc
aatattgcccagagcacctttcccgactgggctgcggatgtgcttggggttgtgctgccg
gagcagaatgctgcagaaaccatgagttattggttcgaaagagaaggcggcatgccggag
atcacggaagaaaccccgggccgcttcaagggatcgactgcactgatgggaattatagaa
tcggtcataggcctgctggagaacggtgcggtgccggcaggggattttagtccatgggaa
ggctcggtgctgcaccgctccatgatactgcgctggcataatgaggaatacgccccatat
ccgcctgccaagcgcaaggagcgggtgatggcgcggattcaccgctggatcgaaatggag
ctgaagaaaagcccgtcggctgcggcgatgaaggaccgcaagaagaaaagcgctgcacgt
gagaaggcctacagtgccaaatggccgaaatatgacccgctgacgatatacaagcagatt
ttccgtgcagtgaaggtgcctgaagattggccagcggaggccccggagagcattccgccg
gaagtgctggcatcaacagtcaaggagctcaaaaaaggcattttgcatgaagaggatctg
cctccgctgctctatattcattatttgctgaacggcaatgaaggcggcagcggctttgat
catatcgtgatcgatgaagcccaggatttctcgccttttcagatagcggtgctggacctg
tatgtaaaaggacattcctttaccatcctgggcgatctgtcacaggggattcatgcctat
aaaggcgtccatgcctgggaagaaatgcagaccctgttcgccccggagcacacagcttac
cacgccctgacgcgtagctaccgttcaacgatggagattattgaatttgccaacggcatt
ctgtctgccggagtcggcagcagcctgctcgctgtgcctgtcttccgcagcggaaatccc
gtgcgtctgatatcctacggccagccgctcccggcgtccgctgcaggcggagaccgccgg
attcaggccgttagaacagcgctcgcatcgctctcgggccgggaataccgcacgttggcc
gtattaacccgcagcctgcgggaagccgctgagttgtacacagagcttgctgggcatttc
gaggatattcatctgatcgacggcagcatgactgaataccggggaggactgtccgtgctt
ccggtttatctgtccaaggggctggagttcgacgccgtcatcctcgccgatgccgattca
gaccattacggcggtgcagcgtgggatgcgaagctgatgtatgtaggctgtacccgggcc
ctccatgagctgtggatactgcacggagaagggcttcccccatatttgcagaatggagaa
ggaaccgtgcagggctggccggagtaa
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