Paenibacillus riograndensis: PRIO_5465
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Entry
PRIO_5465 CDS
T03849
Symbol
capD
Name
(GenBank) Capsular polysaccharide biosynthesis protein CapD
Organism
pri
Paenibacillus riograndensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
NAD_binding_4
KR
NAD_binding_10
DUF3842
adh_short
PglD_N
PLDc_2
WHD_TTC3
Motif
Other DBs
NCBI-ProteinID:
CQR57854
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Position
I:complement(6359778..6361610)
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AA seq
610 aa
AA seq
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MTAKTRVYLLFLIDLAIIWFSIVTSYMFRFSKGIPDEYTLQMLVFGLIATVTFGGSLIYF
GLYRRLWQYASIDEIISVFKAIVVGAVLSFVAAFIILPERVPLSIEVRAMETILLLVGGV
RFCWRVFRNDRINSKDTETHTLIVGAGDCGILIAREMMGPSFAHTRIVGFIDDSADKYHL
SILGVPVLGNRYDIPRLVKELEIHEIIIAMPSVSRTEISEIINLAKATGAKLKIIPALND
LIAGKISVKKLRDVSVEDLLGREPIVADMNSILGYVHNKTVLVTGAGGSIGSELCRQISP
FAPDKLLILGHGENSIYTIEMELRKSFPDLNIVTVIADVQDRTRMMEVFQSHSPHVVFHA
AAHKHVPLMERNPSEAIKNNVFGTRNVADCADKYGAERFVLISSDKAVNPTSVMGATKRI
AEMYVQSLNTSSPTKFSAVRFGNVLGSRGSVIPAFKQQIAAGGPVTVTHPEMVRYFMTIP
EAVQLVIQSGSFANGGEVFVLDMGQPVRILTLAEDLITLSGYEPYKDIEITFSGIREGEK
LYEELLTAEENLGSTRHNRIFIGRPNVLSQNQLELEFKRLERVLSEDGDAIREVINQIVP
MQPVAQAAIS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgaaaaccagagtttatttattattcctcattgaccttgcgatcatctggttc
agtatcgtgacttcttatatgttccggttttccaagggcatacctgacgaatatacgctt
cagatgctggtgttcggtcttattgcgacagtaacctttggaggcagtctgatctatttt
ggcttgtaccgcagattatggcagtatgccagcattgatgagatcatttctgtattcaaa
gcgatcgttgtaggagctgttctttcctttgtggcggcatttatcattttgccggaacgg
gtccccctcagcattgaggtgcgcgcgatggaaacgatcctgctcctggtgggcggagtc
cgcttctgctggagagtgttccgcaatgatcgtattaactccaaggatacagagactcat
accctgattgtgggtgccggtgactgcggaatactgatcgcccgggaaatgatgggtcca
tcgtttgcgcatacgcgaattgttggcttcattgatgacagtgcagataaataccatctg
tctatcttgggggtacccgttctcggcaaccgttatgatattccccggcttgtgaaggaa
ctcgaaattcatgagattattatcgctatgccttctgtatcccgaacggaaatctctgag
attattaacctggcgaaggccaccggggccaagctgaagatcattcctgcacttaatgac
ttgattgccggcaaaatttcggtaaaaaagctgcgtgatgtcagcgtagaagatttgctc
ggacgcgaaccgattgtggctgacatgaacagcattctcgggtatgtacataacaagacg
gtattagtcaccggagccggaggttcgattggctctgagctatgccgtcagatctcccct
tttgccccagacaagctgttaattctcggacacggcgaaaatagcatttacacgatagag
atggaattgcgcaagagcttcccggatctgaacattgttaccgtaattgcggatgttcag
gaccgcacgcggatgatggaagtattccagagtcacagcccgcatgtagtctttcatgcg
gcagcgcataagcacgttcctctgatggaacgtaatccctccgaggccattaagaacaat
gtcttcgggacccgcaatgtagctgactgtgctgacaaatatggagcggaacggttcgtg
ttgatctcctctgacaaagccgtaaatccaaccagtgtgatgggagccaccaaacgtatc
gcagaaatgtatgtccagagcctcaatacctccagcccaaccaaattctcagcagtacgt
ttcgggaatgtcttgggcagccggggaagcgtcattcccgccttcaaacagcagatcgct
gcgggcggaccggttaccgtaacccatcccgagatggtacgctattttatgacgattccg
gaagcggtccagctggtcatccaatccggatcattcgcaaatggcggagaagtctttgta
ctggatatgggccaaccagtgaggattctgaccttagccgaggacctgattaccttgtcc
ggctatgagccttacaaggatattgagattaccttctccggaatacgggaaggtgagaag
ctgtacgaagaactgctgacagccgaggagaatctgggttccacccggcataaccggatc
ttcatcggcagacccaacgtccttagccagaatcagctggagctggagttcaaacgcctg
gaacgtgtattatccgaagacggagacgctattcgtgaagtcattaaccagattgtgccg
atgcagccggtagctcaagctgcgattagctaa
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