Paenibacillus riograndensis: PRIO_5623
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Entry
PRIO_5623 CDS
T03849
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pri
Paenibacillus riograndensis
Pathway
pri00020
Citrate cycle (TCA cycle)
pri00190
Oxidative phosphorylation
pri00650
Butanoate metabolism
pri00720
Other carbon fixation pathways
pri01100
Metabolic pathways
pri01110
Biosynthesis of secondary metabolites
pri01120
Microbial metabolism in diverse environments
pri01200
Carbon metabolism
Module
pri_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pri_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PRIO_5623 (sdhA)
00650 Butanoate metabolism
PRIO_5623 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PRIO_5623 (sdhA)
00720 Other carbon fixation pathways
PRIO_5623 (sdhA)
Enzymes [BR:
pri01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PRIO_5623 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
FAD_oxidored
GIDA
NAD_binding_8
AlaDh_PNT_C
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CQR58010
UniProt:
A0A0E4HDE4
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All DBs
Position
I:complement(6542161..6543903)
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AA seq
580 aa
AA seq
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MASADIIIVGGGLAGLMATIKAAESGAHVHLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWEHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTK
RHRTAFAGATTGQQLLYALDEQVRRWEAEGMVTKSENWEFLSVILDDERVCRGISAQNLK
TMEIQTFPADAVILASGGPGIIFGKTTNSVINTGTAASAVYQQGVYYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPSYGNLVPRDIATREIFNVCVDQG
LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFMGDDPRKIPMKIFPAVHYSMGGMWV
DYNQMTNIPGLFAAGECEYQYHGANRLGANSLVSAIYGGMVSGPKAVEYIKGLKKSVQDI
SSTVFDSFHKTQTDKYESLLAMSGTENAYVIHKELGEWMTANMTVVRENTKLTATIGKIK
ELKERYRRINMNDTSRWNNQGVAFTRQLWNMLELSEAMTLGALLRNESRGAHYKPEFPAR
NDEEFLKTTKAAWTADGPQISYEEVDVSLIPPRVRDYSKD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagccgatatcattatcgtgggcggggggctggccggcctgatggctaccatc
aaggcggcagaatccggcgcgcatgtgcatctattctcccttgttcctgtcaaaagatcg
cattcggtctgcgcgcaaggcggcatcaacggagcggtgaacaccaaaggcgagggagac
tcgccctgggagcatttcgacgatactgtgtacggcggcgatttccttgccaaccagcct
ccggtgaaggcgatgtgcgaggccgcaccgggcatcatccatctgatggaccggatgggc
gtcatgttcaaccgcacgccggaggggctgcttgacttccgccggttcggcggcacgaag
cgccaccggacagcttttgcaggtgcgacgaccggccagcagctgctgtatgcgctggat
gagcaggtacgccgctgggaagccgaaggcatggtcaccaaaagcgagaactgggaattc
ctctcggtgatcctggacgatgagcgtgtatgccgcggcatcagtgcccagaatctcaag
acgatggagattcagacgttcccggcggatgcggtgattctggcgagcggcgggcccggc
attatttttggcaaaacaacgaactcggtcatcaacaccggaaccgctgccagcgctgta
tatcagcagggtgtatattacgccaacggcgaattcattcagatccaccccacagccatt
cccggcgatgacaagctgcggctgatgtcggaatcggcgcgcggtgaaggcggacgcatc
tggacctacaaggacggcaagccgtggtacttcctggaggagaaatatccttcttacggg
aatctggtgccgcgcgatattgcaacccgggagatttttaatgtatgtgtcgaccagggg
ctgggcattaacggcgagaacatggtatacctggatctctcccacaaggacccgaaagag
ctggacgtcaagctaggcggcattatcgaaatctatgagaaattcatgggcgatgatccc
cgcaaaattccgatgaaaatcttcccggctgtgcattactccatgggcggcatgtgggtc
gactacaaccaaatgaccaatattcccgggctgttcgcggcaggggaatgcgaataccaa
tatcacggcgcgaaccggctgggcgcgaactcgcttgtatcggcgatctacggcggcatg
gtctctgggccgaaggctgttgaatatattaaggggctgaagaaatcggtacaggacatt
tcctctaccgtctttgacagcttccataagacacaaaccgataaatacgagtctttgctg
gcgatgtcaggcacagagaatgcctatgtcatccataaagagctgggcgaatggatgacc
gccaacatgacggtggtgcgcgagaataccaagcttaccgccaccatcggcaaaattaaa
gagttgaaggaacgctaccgccggatcaacatgaacgatacgtcgcgctggaacaaccag
ggtgtggccttcacccgccagctgtggaacatgctggagttgtccgaggccatgaccctg
ggcgcgctgctgcgcaacgagagccgcggcgcgcactacaagccggaattccccgcccgc
aatgacgaggagttcctgaagaccaccaaggccgcatggacggcggacggcccgcaaatc
tcttacgaagaagtggatgtgtcgctgattcctccacgggtgcgggattactcgaaggat
tga
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