Paenibacillus riograndensis: PRIO_6213
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Entry
PRIO_6213 CDS
T03849
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pri
Paenibacillus riograndensis
Pathway
pri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PRIO_6213 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pri03400
]
PRIO_6213 (uvrB)
DNA repair and recombination proteins [BR:
pri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRIO_6213 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PRIO_6213 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UvrD-helicase
AAA_7
AAA_5
AAA_19
AAA_16
DUF87
TrwB_AAD_bind
AAA_25
DUF1995
nSTAND_NTPase5
AAA
HEM4
fvmX5
Motif
Other DBs
NCBI-ProteinID:
CQR58560
UniProt:
A0A0E4HFB2
LinkDB
All DBs
Position
I:complement(7235110..7237101)
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AA seq
663 aa
AA seq
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MSDIVVSTQTFQLESEYTPQGDQPHAIQELVDGIRQGKKHQTLLGATGTGKTFTIAQMIS
KLNRPTLVIAHNKTLAAQLASEFKEFFPSNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPKEYGSLLLSLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVVEIFPASQGEHAIRVELFGDEIERITEIDVLTGEL
IGERDHVAIFPASHFVTQEETMRVALVNIERELEERLAVLRDAGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFREPGATPYTLMDYFPDDMLIVIDESHVTLPQIRAMYNGD
RARKTVLVEHGFRLPSALDNRPLQFEEFEDKVNQIVYVSATPGPYELEHCDTMVEQIIRP
TGLLDPIIEVRPTEGQIDDLISEIRERVERDERVLVTTLTKKMSEDLTDYFKEIGIKVRY
MHSDIKTLERMAILRDLRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNSNGRVIMYGDHITESMEKAMTETQRRRETQIAYNEKHGITPTTINKKVRD
IIEATKVAESKAEYLTGVGGKMSKKDRQSLMQRLEAEMKDAAKNLQFERAAELRDALLEL
RAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattgtcgtcagtacgcagacttttcaattggagtccgagtatacaccccag
ggcgatcagcctcatgccatacaagaattagtagacggcatccggcagggcaagaagcac
cagacgctgctgggagcgacgggtacagggaagacctttaccatcgcacaaatgatttcc
aagctgaaccggcctacgctggttattgcacacaacaagacactggctgctcagctggcg
agtgagttcaaggagttttttccaagcaattcggtagactacttcgtcagctactacgat
tactaccagccagaggcgtacattccctcctccgacacctacatcgagaaagattccagc
atcaatgaagaaatagataagctgcgtcactccgcgaccagttccctgttcgaacggcgt
gacgttattattgtcgccagcgtctcctgcatttacggcctcggctcgccaaaggaatat
ggaagcctgctgctttcgctgcgggtggggatggagaagccgcggaaccagatactgagc
cggctcgtggatatccagtatcagcgcaacgacattaactttgtgcggggcacatttcgt
gtgcgaggtgatgtggtagagattttcccggcctcgcagggcgagcatgccatccgtgta
gagctgttcggtgatgagatcgagcgcattaccgaaattgacgtgttgaccggagagctg
atcggggaacgcgaccatgtggcgattttcccggcctcccactttgttacccaagaggaa
acgatgcgcgtggcacttgttaatattgagcgggagctggaagaacggctggctgtactc
cgggacgccggcaagctgctggaggcccagcggctggagcagcgcacccgctacgatatc
gagatgatgaaggaagtcggcttttgttcaggtatcgagaactattccggaccgcttacc
ttccgtgagcctggagcaacaccgtatacactcatggattatttccctgatgatatgctg
attgtaatcgacgaatcccatgtgaccttgccgcagatccgggcgatgtacaacggcgac
cgggcacgcaagaccgttctcgtggagcatggcttccgcctgccgtccgcgctcgacaac
cggccgctgcagtttgaggaattcgaggacaaggtgaatcaaatcgtatatgtgtcagcc
acacccggcccatacgaattggagcattgcgacactatggttgagcagatcatccgtcct
accggtcttttggatccgattattgaggtgcgtccgactgagggccagattgatgatctg
atcagcgaaatccgtgaacgggtggagcgtgacgagcgtgtgctggttacaaccctgacg
aagaaaatgtccgaggatctgaccgattatttcaaggaaatcggcatcaaggtgcgctat
atgcattccgacatcaagacgctggagcgcatggcgattctgcgtgatctccggctgggc
accttccatgttcttgtggggatcaacctcttgcgggaagggcttgatttgcccgaggta
tccctggttgcgattctcgatgccgacaaggagggcttcctccgctcggagcgttcgctg
attcagaccattggccgtgcggcccgcaactctaacggccgagtaattatgtatggtgac
catatcacggaatccatggaaaaggctatgaccgaaacccagcgccgccgggaaacgcag
attgcctacaacgagaagcatggcatcaccccaacaacgatcaataagaaagtgcgcgat
atcatcgaggcgacgaaggtcgccgagtccaaggcagagtatctcaccggcgtgggcggc
aagatgagcaagaaggaccgccaaagcctgatgcagcgtctggaggctgagatgaaggat
gccgccaagaacctgcaattcgagcgcgccgctgagctgcgcgatgcacttctggagctg
cgggccgagtaa
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