Providencia rustigianii: NCTC6933_00273
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Entry
NCTC6933_00273 CDS
T06047
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
prj
Providencia rustigianii
Pathway
prj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC6933_00273 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prj03400
]
NCTC6933_00273 (alkA)
Enzymes [BR:
prj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NCTC6933_00273 (alkA)
DNA repair and recombination proteins [BR:
prj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC6933_00273 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
VEB63152
LinkDB
All DBs
Position
1:complement(285236..286138)
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AA seq
300 aa
AA seq
DB search
MTPTQTIQLLLPPHYRVDDFFAFHLRDPQNIAEIVTENTLRKGIIWQQYPAQITLSIENH
NATFSLDIDALQVSATQHEKLTLATHLLGLNQPVELFEDIYLSHPILGKLITPQRGVRVY
QSASTFEALVWAIIGQQISVLAAIAIRRRFIQAVGMQHSSGIWCFPTVQQVAQVDDNILR
KTGFSTGKIIALRGVCEAIENQRLDLDLTVTPDNVEDVTAQLLAIKGIGPWTISYALLRG
FNYLDGSLHGDVAVRRNLQTLLNHTEQPSTKETQHWLVQFAPWRALVAAHLWRYQSAAGY
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacccctacacaaactatccaattattgttgccccctcactaccgagttgatgatttt
tttgcctttcacttacgtgatccgcaaaatattgccgagatcgtgacagaaaatacctta
cgcaaaggcattatctggcaacaatatcccgcacaaattaccttgtcgattgaaaatcat
aacgccactttttcattagacatcgacgcgttacaagtcagtgcaacgcaacatgaaaag
ctcactttagccacacatttattagggctcaaccaacccgtggagctgtttgaagatatt
tatttatcccatccgatactgggcaaactgatcactccccagcggggcgttcgtgtctat
cagtctgccagtacctttgaagccttagtttgggcgattatcggtcagcaaatcagtgta
ttagctgctattgccattcgtagacgctttattcaagccgtaggaatgcaacactcttca
ggaatttggtgttttccaaccgtacagcaggttgcccaagtggatgacaatattttacgt
aaaacggggttttcgactggaaaaattattgcactgcgcggcgtctgtgaagccattgaa
aaccagcggctcgatcttgatcttaccgttacacccgataatgtcgaagacgttacagcg
caattgctggcaatcaaaggcattggaccttggacaataagttatgcgctactgcgtggg
tttaactatctggatggttctctacatggggatgtagcagttcgacgtaacctgcaaact
ttattaaaccacaccgagcagcctagcaccaaagagacccaacattggttagtgcaattc
gcgccatggcgagcattggttgcagcccatttatggcgatatcaatctgccgcaggctat
taa
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