Providencia rustigianii: NCTC6933_00399
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Entry
NCTC6933_00399 CDS
T06047
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
prj
Providencia rustigianii
Pathway
prj03030
DNA replication
prj03410
Base excision repair
prj03420
Nucleotide excision repair
prj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC6933_00399 (polA)
03410 Base excision repair
NCTC6933_00399 (polA)
03420 Nucleotide excision repair
NCTC6933_00399 (polA)
03440 Homologous recombination
NCTC6933_00399 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prj03032
]
NCTC6933_00399 (polA)
03400 DNA repair and recombination proteins [BR:
prj03400
]
NCTC6933_00399 (polA)
Enzymes [BR:
prj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC6933_00399 (polA)
DNA replication proteins [BR:
prj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC6933_00399 (polA)
DNA repair and recombination proteins [BR:
prj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC6933_00399 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC6933_00399 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Prok-E2_E
MdcG
HHH
Motif
Other DBs
NCBI-ProteinID:
VEB63277
LinkDB
All DBs
Position
1:405561..408365
Genome browser
AA seq
934 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYSPSHVAV
VFDAKGKTFRDELFESYKSHRPPMPDDLRAQIAPLHEMVEAMGLPLLVVPGVEADDVIGT
LAREASSKGMPVLISTGDKDMAQLVEPNITLINTMTNTILGPEEVEAKYGVPPSLIIDFL
ALMGDSSDNIPGVPGVGEKTALALLQGIGSLEAIYNDLEAIAPLGFRGSKTLAPKMAENR
ELAFLSYQLATIKTDVELEKPCEELKVAELDADKLHQLFSRYEFKRWLVDVENGSWMDAK
GAKPSKAAESYRAPENKPAAKSKPTAPTLSAENYQTILDKAELALWVKKLSEASLFAFDT
ETDSLDTQEARLVGMSFAIEAGHAAYLPIGHDYLDAPVQLSLDDVIAVMKPILENEKIGK
IGQNLKYDAEVLENYGIELKGIAFDTMLESYVLNSVAGMGRHDMDSLADRHLNHKTVSFE
EIAGKGKKQLTFNQIPLEQAANYAAEDADVTLLLHQALFPQLEEEPKLAHVFKNIEMPLV
PVLVRMERKGVLIDAPTLAAQSKIITARLAELEKQAFELAGEEFNLASPKQLQTILFEKL
QLPVIKKTPSGAASTNEEVLEELALNHELPKLLLEHRSLAKLKSTYTDKLPLMINPKTGR
VHTSYHQAVTATGRLSSRDPNLQNIPVRTEEGRRIRQAFIARKGYKVMAADYSQIELRIM
AHLSQDKGLLTAFAEGKDIHKATAAEVFGVPLDQVTSDQRRSAKAINFGLIYGMSAFGLA
RQLGIPRGEAQRYMDLYFERYPGVLRYMENTRLQASEQGYVETLEGRRLYLADIKSSNGM
RRKAAEREAINAPMQGTAADIIKKAMIAVDHWLQTEKPEADMLMQVHDELVFEVKESELE
KVQAKVQELMEQSMKLDVPLKVEVGVGFNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattgctgaaaatccccttattttggtagatggttcttcttacctttaccgc
gcttatcatgcatttcctccattaactaacagtgctggcgaaccaaccggtgcaatgtat
ggtgtgcttaatatgctgcgtagtttaatcatgcaatatagcccaagccatgtcgctgtt
gtctttgatgctaaagggaaaacattccgcgacgagctatttgaaagttataagtcacac
cgtccgccaatgcctgacgacctacgtgcacaaattgcaccgttacatgaaatggttgaa
gcgatgggattacccctgctggtggtacctggggttgaagctgatgatgtgattggaacg
ctggcacgcgaagcgagcagtaaagggatgcctgtgttgatcagtacaggggataaggat
atggcacagctcgttgagccaaatatcaccctgatcaacaccatgaccaataccatttta
ggtcctgaagaagttgaagcaaaatacggggttccacctagcttgattatcgatttcttg
gcgcttatgggggattcttcagacaacattcctggtgtacccggtgttggtgaaaagact
gcattagcgttattacaagggattggtagcttagaagctatttataatgatttagaagcg
atcgccccattaggctttagaggctcaaaaacccttgcaccaaaaatggctgaaaaccgc
gaattagcgttcttatcgtaccaattggcgacaattaaaacggatgttgagttagaaaag
ccgtgtgaagaattaaaagtggctgaacttgatgcagataaactccatcagctttttagt
cgctatgaatttaaacgctggttagtcgatgttgaaaatggcagctggatggatgctaaa
ggcgcaaaaccaagtaaagcagctgaaagttatcgcgccccagaaaataagcccgccgca
aaatctaaaccgactgcaccgactttaagtgccgaaaactaccaaactattttagacaaa
gcggagttagcactgtgggtgaaaaagctcagtgaagcttctctgtttgcgtttgataca
gaaaccgatagtttagatacccaagaagctcgcttggtggggatgtcattcgcgattgaa
gcggggcatgccgcttatttacctatcggtcatgattatctggatgcgcctgttcaacta
tcacttgatgatgttatcgctgtgatgaagccaattcttgagaacgaaaagattggcaaa
attggacaaaatcttaaatacgatgcagaagtactggaaaattacggtattgaactgaaa
ggcattgcattcgataccatgctggaatcctatgtgttgaatagtgtggcgggcatggga
cgtcatgatatggatagcctagcggatcgtcatctcaaccataaaacagtgagttttgag
gaaatcgcaggcaaaggtaaaaaacagctgacattcaaccaaattccattagagcaagcg
gctaattacgcagctgaagacgcagatgtcactttattactgcaccaagcgctattccct
cagcttgaagaagaaccgaaattagcccacgtattcaaaaatatagaaatgccattagtg
ccagtattggtgcgaatggaacgtaaaggcgtcctgattgatgcaccaacgttggcggca
caatctaagatcattacggcgcgtctggctgagctggaaaaacaggcgtttgaactagcg
ggtgaagagtttaatctggcatccccgaaacagctgcaaactattttgtttgaaaagctt
caattgcctgttatcaagaaaacaccaagtggtgcagcttcaacgaatgaagaagtgctt
gaagagctggctctcaatcatgaattaccaaagttactgttggaacatcgtagtttagcc
aaactgaaatctacttatactgataagttaccgttgatgatcaacccaaaaacggggcgt
gtgcatacttcgtatcaccaagcggtcactgcaacaggtcgtttatcttctcgtgatcct
aatctgcaaaatattccagtgcgtacggaagaaggtcgccgtattcgccaagcctttatt
gctcgcaagggctacaaagtgatggcagcggactattcacagattgaactgcgtattatg
gcgcatctttcccaagataaaggcttattaaccgcctttgcagaagggaaagatatccac
aaagcgacagcggcagaagtgtttggcgtaccgttagaccaagtgaccagcgaccaacgt
cgtagtgcaaaagcgattaactttggtttgatctacggaatgagcgcattcggtttagcg
cgtcaattggggatcccgcgtggagaagcccagcgctatatggatctctattttgaacgc
tacccgggtgttctgcgttatatggaaaatacccgtttgcaggcatcagaacaggggtat
gttgagaccttagaaggtcgacgactctatctggcagatatcaaatcaagtaacggtatg
cgtcgtaaagcggctgaacgcgaagccatcaacgcaccaatgcaagggacagcggcagat
atcatcaaaaaagcgatgattgcagtggatcactggctacaaacagaaaaaccagaagca
gacatgctaatgcaagtgcacgatgaattggtgtttgaagtgaaagaatccgaactagag
aaggtgcaggcgaaagtgcaagagttgatggagcagagcatgaagttggatgttcctcta
aaggtggaagttggtgttggctttaactgggatgaagcccattaa
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