Providencia rustigianii: NCTC6933_01149
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Entry
NCTC6933_01149 CDS
T06047
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
prj
Providencia rustigianii
Pathway
prj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC6933_01149 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prj03400
]
NCTC6933_01149 (uvrB)
DNA repair and recombination proteins [BR:
prj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC6933_01149 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC6933_01149 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
ABC_tran_CTD
Kinesin
SBDS_domain_II
Motif
Other DBs
NCBI-ProteinID:
VEB67294
LinkDB
All DBs
Position
1:1178789..1180807
Genome browser
AA seq
672 aa
AA seq
DB search
MSKDFKLYSDFQPGGDQPEAIRKLIEGLEDGLAHQTLLGVTGSGKTFTIANVIAQENRPT
MLMAHNKTLAAQLYSEMKGFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDSYLKMMLHLTDGMIIDQRSILRRLADLQ
YTRNDQAFTRGTFRVRGEVIDIFPAESDEYALRVELFDDEVERLSLFDPLTGAIQHRIPR
FTVYPKTHYVTPRERILEAMEQIKIELADRRRVLLENNKLIEEQRVAQRTQFDLEMMNEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPADGLLVVDESHVTIPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEAAAPQTIYVSATPGNYELEKSGHEVIEQVVRPTGLLD
PIIEVRPVTTQVDDLLSEIRLRVEKQERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITNSMAKAIAETERRRAKQIEYNEAHGITPQGLKKKVGDILQIG
HKVGGKGKGRGKGSNKEDLALNIQSMSTKELEQRISQLEAQMYKHAQDLEFEAAARVRDE
LQTLRNQFIANS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggattttaaactgtattctgatttccagcctgggggagatcaacccgaggca
attcgtaaactaatagaagggctggaagatggacttgctcatcaaacgttattaggggta
acggggtctgggaaaacattcaccattgccaacgtgatagcacaagaaaaccgcccaacc
atgctgatggcgcataacaaaacattggcggcgcagttatacagtgagatgaaaggtttc
ttccctgacaacgcggttgaatattttgtctcttactatgattactatcaacctgaagcg
tatgtgccaagctcagatacttttattgaaaaggatgcctcgataaacgaacatatcgag
caaatgcgtctgtctgctactaaagcactattggaacgccgagatgtgattgtagtagct
tctgtgtcagctatttacgggttaggtgaccctgacagttacttgaagatgatgctgcat
cttacggacgggatgattatcgaccagcgttcgattttgcgccgccttgccgatctacaa
tatactcgtaatgaccaagcgtttactcgcggtacatttcgcgtgcgtggtgaggtcatt
gatattttccccgctgaatctgacgaatatgcgctgagagtggaattatttgatgatgaa
gttgagcgtttatcactttttgatcccctcactggcgctattcaacatcgaattcctcgc
tttacggtgtacccaaaaactcactatgtgaccccaagagaacgtattctcgaggctatg
gagcagataaaaattgagttagcggatagacgtcgggtactgctggaaaataataagctt
attgaagagcagcgcgtcgctcaacgaacccaatttgatttagaaatgatgaatgaattg
gggtactgctctggaattgaaaactactctcgttatctatcgggcagagcaccgggcgag
ccaccaccaacgttatttgattatttacccgcagatggcttgttagtggttgatgaatcc
cacgttaccatcccacaaattggtgcaatgtataaaggcgatcgctctcgtaaagagaca
ttagttgaatatggtttccgtttgccttctgcgttagataaccgcccaatgcgttttgaa
gagttcgaagctgctgcgccacaaactatttatgtctcagcgacaccgggtaattatgaa
ttagagaaatccggtcatgaggtcattgagcaagtcgtcaggccaacagggttacttgat
ccaatcattgaagttcgtccagtaacaactcaggttgatgatttactgtctgagattcgt
cttcgtgtggaaaaacaggaacgtgttttagtgaccacattgactaaacgtatggctgaa
gatttaacggaatatctcgaagagcatggagaacgtgttcgttatcttcactctgacatt
gataccgtagaacgtgtggagatcatccgtgatttacgcttgggtgagttcgatgtgctg
gtgggaattaacttgctgagggaaggtctggatatgccagaggtttctctagttgcgatc
ctagatgccgataaagaagggttcttacgttccgaacgttcattaatccaaaccattggt
cgtgctgcacgtaacttgaatggtaaagctattctctatggagatagaattaccaattca
atggcaaaagcgattgcggaaacagagcgccgccgtgcaaaacagattgagtataacgaa
gcccatggtattacccctcaagggctgaagaagaaagtcggcgatattctgcaaatcggt
cataaagtcgggggcaaaggtaaaggacgcggcaaagggagcaacaaagaggatctggcg
cttaatattcagtcaatgtcgaccaaagagttggaacagcgtatttcacaacttgaagct
caaatgtacaagcatgctcaagatcttgaattcgaagccgcggctcgagttcgtgatgaa
ttacaaacgctacgtaatcaatttattgcgaattcgtaa
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integrated database retrieval system
