Providencia rustigianii: NCTC6933_01309
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Entry
NCTC6933_01309 CDS
T06047
Symbol
apxIB_2
Name
(GenBank) RTX-I toxin determinant B
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
prj
Providencia rustigianii
Pathway
prj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC6933_01309 (apxIB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prj02000
]
NCTC6933_01309 (apxIB_2)
02044 Secretion system [BR:
prj02044
]
NCTC6933_01309 (apxIB_2)
Transporters [BR:
prj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCTC6933_01309 (apxIB_2)
Secretion system [BR:
prj02044
]
Type I secretion system
RTX toxin transporter
NCTC6933_01309 (apxIB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
ABC_ATPase
DEAD
nSTAND3
AAA_PrkA
DUF87
AAA_22
AAA_18
Fimbrial_K88
AAA_14
Peptidase_C39
ATP-synt_ab
AAA_5
Motif
Other DBs
NCBI-ProteinID:
VEB67866
LinkDB
All DBs
Position
1:complement(1343172..1345259)
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AA seq
695 aa
AA seq
DB search
MDSVKAQSTTYFIGIIAKLSNEIDYDEFKQTTANISNYHDYIKLIKNKYSIKCINKHQAN
KLINKISTPAILYDTYGQAFLLANHNQDQVLIQRFGQCPPEILTYKELEEIWNGDWLKVK
IKQGKFDISWFQIEFMKYRKIIILVLVFSFILQILALASPIVMQVIMDKVLIHSNLMTLD
LLILGLIIAAIIEVILKGLREYIYNHTVNRIDITLGLKLVNHLLHLPIPFFKNRQIGAIV
TRVKELETIREFLTSSFFTLCVDVLFLFVFVYVMSLLSSSLTWLFLCSIPCYLIVAWWLT
PKIEAAAQQQFANIAINTSFLTESINGIETAKSLSIEPNFTRRWDQQTADMSQTNFVSGQ
ISSRSEHIVMVIEKVTSAIILWVGAAEVLALQLTIGQFIAFHMMVSHANQPLVKLVKLWG
DYIRTKVAIEKLSQIINLPIEQSKQEKYLQLTGDIQLHNLNFRYQPNMPYILNDFSLSIK
AGETLGIVGTSGSGKSTLARLILRLYTPEKGAIYLNGVPISSISLKILRKQVGIVLQENF
LFNQSVFHNIAQTSPNASMDQVVHAAKMAGAHDFILKLPMGYDTLLAEGGSSLSGGQRQR
IAIARTLLSDPKIIIFDEATSALDDESQAVIQENMQEIAKGRTVITIAHRLSTIRNHQRI
IVMQKGRITEQGSHQQLIENDKFYKHLWTLQQSLK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgttaaagcacaatcaacaacatattttattgggatcatagctaaactttct
aacgaaatagactatgatgaatttaaacaaaccacagctaatatttcaaattatcatgat
tatattaaattaattaaaaataaatattcaattaaatgtatcaataaacaccaagctaat
aagctaatcaataaaatatctactcctgcaattttatacgatacatatggacaagcattt
cttcttgccaatcataatcaagatcaagtcctcatacagcgatttggacagtgtcctcca
gaaattttaacctataaagaattagaagaaatatggaatggtgattggttaaaagttaaa
attaaacaaggaaaatttgatatttcatggtttcaaattgaattcatgaagtaccgtaaa
ataattattttggtcttggttttttcatttatcttgcaaatactcgccttagcatctcct
attgttatgcaagttattatggataaagtactcattcatagtaatttgatgactctcgac
ttattaattttaggtttgattattgccgcgataattgaagttatattaaaaggattacga
gagtatatttataatcacacagttaatcggattgatattacattaggattaaagctagtt
aatcatttattacatctacctattccattttttaaaaatcgtcaaattggcgctatcgtt
actcgagttaaagaactcgaaactattcgagaatttttgactagtagcttttttacttta
tgtgttgatgtcttgtttttatttgtttttgtctatgtgatgagcctactgtctagttcc
ctcacttggctatttttatgctcaattccctgctatttaattgtcgcttggtggctaaca
cccaagattgaagctgcggctcagcagcaatttgcaaacattgctataaatacatcattt
ttaaccgaaagcattaatggaattgaaacagcgaagagcctctctattgagccaaacttc
actcgtcgttgggatcagcaaacagccgatatgagccaaactaattttgtctcagggcaa
atatcttcacgctcagagcatattgtgatggtcattgaaaaagtcaccagcgcaattatt
ttatgggttggggccgctgaggttctcgctttacagctgactatagggcaatttattgct
tttcatatgatggtcagccatgccaatcaaccattagttaagttggtaaaattatgggga
gattatattcgaactaaagttgccatcgaaaaactatcccaaataattaatttacctata
gaacagagtaaacaagaaaaataccttcagctcactggcgatatccaattacataatctt
aattttcgttatcaacccaatatgccgtatatcctgaatgactttagcttatcgatcaaa
gccggggaaacattgggaatagtcgggacatctggctcagggaaaagtacattagcacgc
ttaattttacgtctctatacgccagaaaaaggcgcaatttacttgaatggagtgcccata
tcatcgataagtttgaaaatattaagaaaacaagtaggcatcgttctgcaggaaaacttt
ctatttaatcaatctgttttccataatattgcacaaacttcaccaaacgcatcaatggat
caagtcgtccatgcagcaaaaatggcaggggctcatgattttattcttaaacttcccatg
ggttatgacactctattggctgaaggaggttcttcgctatcaggaggacaacgtcaacgt
atcgctatagccagaacattattatctgaccccaaaatcattatttttgatgaagccacc
agcgcccttgatgatgaatcgcaagccgtaattcaagaaaatatgcaagaaatagcaaaa
ggccgaactgttatcacgattgcccatcgcttatcaactattcgtaatcaccaacgaatt
atcgtcatgcagaaaggtagaattaccgagcaaggtagccatcaacaattaattgaaaac
gataaattttataagcatttatggacattacaacagtccctaaaataa
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