Providencia rustigianii: NCTC6933_03141
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Entry
NCTC6933_03141 CDS
T06047
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prj
Providencia rustigianii
Pathway
prj03030
DNA replication
prj03430
Mismatch repair
prj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC6933_03141 (dnaE_2)
03430 Mismatch repair
NCTC6933_03141 (dnaE_2)
03440 Homologous recombination
NCTC6933_03141 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prj03032
]
NCTC6933_03141 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
prj03400
]
NCTC6933_03141 (dnaE_2)
Enzymes [BR:
prj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC6933_03141 (dnaE_2)
DNA replication proteins [BR:
prj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC6933_03141 (dnaE_2)
DNA repair and recombination proteins [BR:
prj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC6933_03141 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
Motif
Other DBs
NCBI-ProteinID:
VEB74471
LinkDB
All DBs
Position
1:complement(3090346..3092004)
Genome browser
AA seq
552 aa
AA seq
DB search
MASPRFIHLRVHSDYSMIDGLAKTGPLVKKVAEMGMPALAITDFTNLCGLVKFYGAAHSA
GVKPIIGADFYMESEQLGDDVAHLTVLARNNEGYQNLTLLISEAYQKGYGAIGPTIHRDW
LVKHKEGLILLSGGRKGDVGQFLLRGNQALVDECIEFYETHFPGSYYLELIRTGRPDEES
YLHAAIELATLRGLPVVATNEVCFIESRDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPKFPTGDMETEDYLVMCSKKGL
EERLEFLFPDEKERAVKRIEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLELDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAQ
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFEVEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKKRCRICGLG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctcgttttattcatctacgcgttcatagcgactattccatgatcgatgga
ctggctaaaaccggtcctttggtcaaaaaagtggctgaaatgggcatgcctgcgcttgcc
atcaccgattttactaacctatgtgggttagtgaaattttatggtgcggcgcatagtgcg
ggtgttaagccaattattggtgctgacttctacatggaaagtgagcagcttggtgacgat
gttgcccatttaactgtactggctcgcaataatgaaggttaccaaaatcttacattattg
atttcagaagcgtatcaaaaaggctatggcgccattggtccgacaatccatcgtgattgg
cttgtgaagcataaagaagggctaattctcctttctggtggccgtaaaggggatgtgggg
cagttcttactgcgaggaaaccaagcgctagtcgatgaatgcatcgagttctacgaaaca
cactttcccggttcatactacctcgaattaattagaacgggtcgacctgacgaagagagt
tatttacatgcagctatagaattagcgacgctgcgcgggttgcctgttgtagccacgaat
gaagtctgttttatcgagagccgtgattttgatgctcacgaaattcgtgtggcaattcat
gatggctttactcttgttgatcctaaacgtccgaaaaattatagtcctcagcaatactta
cgttctgaagaagagatgtgtgagctatttgctgacatcccagaagcgttagaaaatagt
gtagagattgctaagcgctgtaacgtcactatccgtcttggcgagtattttctccctaaa
ttccccacaggggatatggaaaccgaagactatctggtcatgtgctcgaaaaaagggctc
gaagagcggttagaatttttattcccagatgaaaaagagcgggcggtaaaacggattgaa
tatgatgaacgtttggatattgagctgaatgttatcaaccaaatgggattccccggctac
ttcctgatcgtgatggaatttatccaatggtcaaaagataatggcgtacctgtagggcca
ggacgaggttccggtgcgggatctttagtcgcttatgcactgaaaattacagacttagac
ccattagaattagatttactgtttgaacgttttctaaaccctgagcgggtttctatgcct
gacttcgatgtggacttttgcatggaaaaacgtgaccaagtgattgatcacgtagctcaa
atgtatgggcgtgatgccgtatcccagattattacttttggtaccatggctgcgaaagcg
gttatccgggatgtgggacgtgtactagggcatccgtacggttttgtcgacagaatctct
aaattaatcccaccggatccagggatgacgctggaaaaagcgtttgaggttgaacctcaa
ctccctgaaatttatgaagcggatgaagaagttaaagcgctgattgatatggcgcgcaag
cttgaaggtgtgactcgaaatgcgggtaaacatgcgggtggggtagtcattgcccctact
aaaattactgattttgcaccgctatattgtgatgcagaaggaaacaaccccgttacgcaa
tttgataaaaaacgatgtcgaatatgcgggcttggttaa
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