Providencia rustigianii: NCTC6933_03202
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Entry
NCTC6933_03202 CDS
T06047
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
prj
Providencia rustigianii
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prj03021
]
NCTC6933_03202 (rapA)
Transcription machinery [BR:
prj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NCTC6933_03202 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
COG2_N
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
VEB74632
LinkDB
All DBs
Position
1:3156256..3159162
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGAVVAVDARMVTLLFPATGENRLYSRNDAPITRVMFNEGDT
ITSHEGWQLQVEHVQEDEGLLTYIGTRLDTQEADVSLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKFQSEQVKHQATGLRGIRASLIPHQLHIANEVGKRHHPRVLLADEVG
LGKTIEAGMIIHQQLMAGRAERVLVIVPDSLQHQWLVEMLRRFNLRFSLFDDSRYSEAQH
DSDNPFETEQLVLCSLDFVRRNKQRFDQLVEAGWDMMVVDEAHHLQWSENAPSREYQVIE
TLAEHIPSVLLLTATPEQLGQESHFARLRLLDPSRFHDYQEFIAEQENYRPVADAVSLLL
SGDKLTNDQQNLLSELIKEQDIEPLLKAANLDGDDSQVARQELIHMLMDRHGTSRLLFRN
TRNGVKGFPRRELHSLKMPLPTQYQTAIKVAGIMGSKKDLETRAKEMLYPEQIYQEFEGE
NATWWNFDPRVEWLMGFLTANRQEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSL
LERDRAAAYFASQEEGAQVLLCSEIGAEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQTRDIVINVPYLEHTAQSVLLRWYHEGLDAFEHTCPTGRAIYDKYYQQLLQFMAEPTMT
EGFDEFIKACREEHDALKSQLEQGRDRLLEMHSNGGDAGNKLAEEIGEGDNETELVNFAL
NLFDIVGINQEDKSDNLIILTPSDHMLVPDFPGLPQDGCTITFDREQALSREDTQFISWE
HPIIRNGLDLVLSSDTGSCAVSLLKNKALPVGTLLTELIYVVEAQAPKQLQISRFLPATP
VRLLVDLKGNNLSSQVEFESFNRQLNAINRHMASKLVNAVQSEVHSVLRLSEPMVEKEAK
VIIENAKEAADKALTLELSRLEALKAVNPNIRDEELDIIEEERQQLMTNIDQATWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggatcagcgacacagaaagcgaacttggattaggc
gccgttgtggcagttgatgcccgcatggtgacgttacttttccctgcaacaggtgaaaac
agactttactcacgcaatgatgccccaattacccgagttatgtttaacgaaggtgacacc
attaccagccatgaaggctggcaacttcaagttgaacatgttcaagaagatgaagggtta
ctaacttatatcggtactcgcttagatacccaagaagcggatgtcagcctaagagaagtt
tttcttgatagcaaactgacctttaataaaccgcaagaccgactatttgctggtcaaatt
gatcgcatggatcgctttgcgttacgtttccgtgcacgtaagttccaaagtgagcaagtc
aaacaccaagccacagggctacgtggtattcgtgctagccttattccacaccagctccat
attgccaatgaagtgggtaaacgccaccatcctcgcgttctccttgcggatgaagttggt
ttaggtaaaaccatcgaagcgggtatgattatccatcaacaactgatggccggtcgtgct
gagcgcgtgttagttatcgttcctgatagcttgcaacaccaatggctggtggaaatgcta
cgccgctttaatctccgtttttctctgtttgatgatagccgttatagtgaagcgcaacac
gacagcgataacccatttgagaccgagcaattagttctatgttcactggattttgtgcgc
cgcaataaacaacgtttcgaccaattagtcgaagctggctgggatatgatggtcgttgat
gaagcccaccatttacagtggagtgaaaatgcgccaagccgtgaatatcaagtcattgaa
actcttgcggaacatattccatcagtattgctattaaccgcgacccctgagcaactgggc
caagagagccactttgctcgcttacgtctgctcgacccaagtcgttttcacgattatcaa
gaattcatcgctgaacaagaaaattatcgccctgttgctgatgctgtttcacttctatta
tctggcgataaattaacaaatgatcagcaaaatctgctgagtgaattgatcaaagagcaa
gatattgaacctcttttaaaagctgcgaatctcgatggtgacgatagccaagttgcacgc
caagagctgattcacatgctgatggatagacatggaacgagccgtctattattcagaaac
acccgtaatggtgtgaaaggctttccacgccgtgaacttcactctttaaaaatgccactg
ccaacccagtaccaaacagcgattaaagttgcgggtattatgggttcgaaaaaggatttg
gaaactcgcgctaaagagatgctatatccagagcagatttaccaagagtttgaaggtgaa
aatgcgacttggtggaactttgatccacgcgttgaatggctaatggggtttttaactgca
aatcgtcaagaaaaagttctggtaatttgtgctaaagccgccactgcattgcaacttgaa
caagtccttcgcgaacgtgaaggtatccgcgcagcagtattccatgaaggtttatcctta
ctggaacgtgaccgtgcagcggcttatttcgcgtctcaagaagaaggggcacaagtttta
ttgtgttctgaaattggagctgaaggtcgtaacttccagtttgctaaccagttagtgatg
tttgatttaccattcaacccagatttactggaacaacgtattgggcgcttggatcgtatt
ggtcaaactcgagacatcgttatcaacgtcccttatttagaacatacagcgcaatctgta
ttgctccgttggtatcacgaaggtctcgatgcctttgagcacacttgcccaacgggtcgc
gccatctatgataaatattatcaacaactgttgcagtttatggcagagccaaccatgact
gaagggtttgatgagtttattaaagcttgccgtgaagagcacgatgcattgaaatcgcaa
ttggagcaaggccgtgaccgtctgctcgaaatgcactccaatggcggagatgcaggtaat
aaattagccgaagaaattggcgaaggtgataacgaaaccgagctggtaaactttgcactt
aacctgtttgatatcgttgggatcaaccaagaagataagagtgataatttaattatcctg
accccatcggatcatatgctagttcctgatttcccggggctaccacaagatggttgcacc
atcacgtttgaccgtgaacaagcattgtcgcgtgaagatactcaatttatcagttgggag
catccgatcatccgtaatggtttagatttggtcttatcaagtgataccggaagctgcgcc
gtttctttattgaaaaataaagcgctgccagtcggaacattactgactgagctcatctac
gttgttgaagctcaagcaccaaaacaactgcaaattagtcgcttcttaccagcaacaccg
gtacgtttgctagttgacttaaaaggcaataacttgtcatctcaagtcgagtttgaaagc
tttaaccgtcagctaaatgccattaaccgccatatggcgagtaaactggttaatgcggta
caaagcgaagtccattcagtgctacgcctgtccgaaccgatggtggaaaaagaagctaaa
gtcattattgagaatgctaaggaagcggctgataaagcgttaacgctggagctttctcgc
ttagaagcactaaaagcggttaacccaaatattcgagatgaagaactcgatattatcgaa
gaagagcgccagcagctgatgacgaatatcgaccaagccacatggcgcctcgacgctatc
cgcttagttgtcgttacccatcagtaa
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