Providencia rustigianii: NCTC6933_03626
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Entry
NCTC6933_03626 CDS
T06047
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prj
Providencia rustigianii
Pathway
prj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC6933_03626 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prj03019
]
NCTC6933_03626 (pnp)
03016 Transfer RNA biogenesis [BR:
prj03016
]
NCTC6933_03626 (pnp)
Enzymes [BR:
prj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC6933_03626 (pnp)
Messenger RNA biogenesis [BR:
prj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC6933_03626 (pnp)
Transfer RNA biogenesis [BR:
prj03016
]
Prokaryotic type
tRNA degradation factors
NCTC6933_03626 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
KH_2
aRib
Spt6_S1
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
VEB75861
LinkDB
All DBs
Position
1:complement(3598682..3600802)
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AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMIARQATAAVMVNMDDTAVFVTAVAQKKVKEGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPGEGETLVARLIDRPLRPLFPEGFLNEIQIIATVVSV
NPQVNPDIVAMIGASAALALSGVPFNGPIGAARVGYINDQYVLNPTADELKSSRLDLVVA
GTDSAVLMVESEAELLSEEQMLGAVVFGHDQQQVVIQNINDLVKEAGKEKWDWQPEPVNQ
ALKDRIAALAESRMGDAYRITEKQERYAQVNLIKEEVTAALLAEDENVDLSEVSDILAHL
EKQVVRSRVIRGEPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQVIDQLMGEYTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPSHAD
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGNDFVVLSD
ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITREIMQVALNQAKGARLHILGTMEQA
INGPREEISEFAPRIYTIRISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEDITAEVEVGRIYPGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEIDRQGRIRLSMKEAVVSEEAPAQQDSAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaatcctattgttcgtaaattccagtatggccagcataccgtgacattagaaacc
ggcatgatcgcacgtcaagcaactgcggctgtgatggttaatatggatgacactgcagta
ttcgttactgctgtagcacagaaaaaagtgaaagaaggtcaagatttctttcctttaact
gttaactatcaagagcgtacttacgcagcgggtcgtatcccaggcagtttcttccgtcgt
gaaggccgtcctggtgaaggcgaaactttagttgcacgcttaattgaccgtcctctacgt
ccgctgttcccagaaggtttcctgaacgaaatccaaatcattgcaaccgttgtttcagtt
aacccacaagttaaccctgatatcgttgcgatgatcggtgcttcagctgcactggctctg
tcaggcgttccattcaatggtcctatcggtgctgcacgtgttggttatatcaatgaccaa
tatgttctgaacccaactgcagacgaattaaaatcaagccgtctggatttagtagttgca
ggtaccgacagcgcagttttaatggttgaatctgaagctgaattattaagtgaagagcaa
atgctgggtgcggtagtgtttggtcacgaccaacagcaagttgttattcaaaacattaat
gatttagtgaaagaagccggtaaagaaaaatgggattggcagccagagccagttaaccaa
gcactgaaagatcgtattgctgcattggctgaaagccgtatgggcgacgcttaccgcatc
actgaaaaacaagagcgttatgctcaagttaacctgatcaaagaagaagtgacagcagct
ctgcttgctgaagatgaaaacgttgatctgtcagaagtttcagacattcttgctcactta
gaaaaacaagttgttcgtagccgtgttatccgtggtgagccacgtatcgatggtcgtgag
aaagacatggttcgtgcgttagacgtgcgtactggtgttctgccacgcacccacggttct
gcgttgttcactcgtggtgaaacacaggcgctggtaacagcaacgttaggtactgagcgt
gatgcacaagttatcgaccaattaatgggcgaatatactgaccgcttcttattccactac
aacttccctccatactctgttggtgaaactggcatggtgggttcacctaaacgtcgtgaa
atcggtcacggtcgcttagctaagcgtggcgtattagcagtaatgccttcacacgcagat
ttcccatacactattcgtgtagtgtctgagatcactgaatctaatggttcatcatcaatg
gcgtctgtctgtggtgcgtcactagctctaatggatgctggtgtacctatcaaagcggct
gttgctggtatcgcgatgggtctggtgaaagaaggtaacgatttcgttgttctgtctgat
atcttaggtgatgaagatcacttaggtgacatggactttaaagttgctggtagccgtgaa
ggtatcagtgctttacaaatggatatcaaaatcgaaggtatcactcgtgaaatcatgcag
gttgctctgaaccaagctaaaggtgcgcgtctgcacatcctaggcacaatggaacaagca
attaatggtccacgtgaggagatctctgaatttgctccacgtatctataccatccgcatt
agcccagacaaaatcaaagatgtcattggtaaaggcggctcggttatccgtgcattaacg
gaagaaacgggtacaactatcgaaatcgaagatgacggtaccgtgaagattgctgcaaca
gatggtctgaaagcgaaagaagcgattcgtcgtattgaagatatcacagcagaagtcgaa
gtcggtcgtatctacccaggtaaagtcactcgtatcgttgacttcggcgcatttgttgcc
atcggtggtggtaaagaaggtctggttcatatttctcaaatcgctgataagcgtgtagag
aaagtgacagattatctgcaaatgggtcaagaagttcctgttaaggtgttagaaatcgac
cgtcaaggccgtattcgcctaagcatgaaagaagcagttgtgagcgaagaagctccagct
cagcaagactcagcggaataa
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