Providencia rustigianii: NCTC6933_03722
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Entry
NCTC6933_03722 CDS
T06047
Symbol
uvrD_2
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prj
Providencia rustigianii
Pathway
prj03420
Nucleotide excision repair
prj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC6933_03722 (uvrD_2)
03430 Mismatch repair
NCTC6933_03722 (uvrD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prj03400
]
NCTC6933_03722 (uvrD_2)
Enzymes [BR:
prj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC6933_03722 (uvrD_2)
DNA repair and recombination proteins [BR:
prj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC6933_03722 (uvrD_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC6933_03722 (uvrD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEB76117
LinkDB
All DBs
Position
1:complement(3689890..3692052)
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AA seq
720 aa
AA seq
DB search
MDVSYLLEGLNDKQREAVAAPRTNLLVLAGAGSGKTRVLVHRIAWLMSVENASPFSIMAV
TFTNKAAAEMRHRINHLIGTSEGGMWIGTFHGLAHRLLRQHYLDANLPQDFQILDSDDQY
RLIRRLLKAMNLDEKQWPSRQGMWYINGKKDEGLRPQHIESYGNPVEATWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLQHYRERFTNILVDEFQDTNSIQYAWIRILAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTNNILKAANTLIANN
SDRLGKNLWTEDGDGEPISLYCAFNELDEARYVVGRIKQWHENGGALQDCAILYRSNAQS
RVLEEALIQSAMAYRIYGGQRFFERQEIKDALSYLRLIANRNDDASFERVVNTPTRGIGE
RTLDTVRQTARDQQLTLWEACEYLLREQVLGGRAASSIERFLELIDALAKETQDMPLHVQ
ADRVIKDSGLRAMYEQEKGEKAQARIENLEELVNATRDFSYQDEDQDLMPLQAFLSHAAL
ESGESQADVSQDAVQLMTLHSAKGLEFPVVFMVGVEEGMFPSQMSMDESGRLEEERRLAY
VGITRAMEKLTITYAESRRLYGKEVYHRPSRFIGELPTECVEEVRLRATISRPVSHQRLG
TPISQNDSGYALGQRVMHPKFGEGTIINLEGSGEHCRLQIAFQGQGIKWLVASYARLENI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctcatatctgctcgaaggtcttaatgacaaacagcgtgaagcggttgctgct
ccgcgcactaatttactggtacttgcgggtgcgggtagtggtaaaacgcgcgtattagta
caccgtattgcttggctaatgtcggtggaaaatgcatctccattttcgattatggccgtc
acatttaccaataaagctgccgcagaaatgcgtcatcgtatcaaccatttaatcggaact
agtgaaggtgggatgtggattggtactttccatggtttagctcaccgtctgctacgtcag
cattatttagatgcgaatcttccacaagacttccaaattttggacagtgatgaccaatat
cgcttgatccgccgtttgctcaaagccatgaatctggatgaaaaacaatggccatcccgc
caagggatgtggtacatcaacggtaagaaagatgaaggattacgacctcaacatattgaa
agttacggtaatccagttgaggcaacttggcagaaagtgtatcaagcttatcaagaagct
tgcgaccgtgcagggcttgtagattttgctgaattactgctaagagcacatgaactctgg
ttgaataagcctcatgttctacaacattatcgtgaacgttttaccaatatcttagtggat
gagtttcaagataccaatagcatccaatatgcttggatccgcatattggcaggtgatacg
ggtaaagtgatgattgttggggatgatgaccaatctatttatggttggcgaggcgctcaa
gtggaaaatattcagcgtttcttgaatgatttccccggcgcagaaacgatccgtcttgag
caaaattaccgttctaccaataatattttgaaagcagcaaacacactgatcgccaataac
agcgaccgtctaggtaagaatttatggacggaagacggtgatggtgagccaatttcgctc
tattgtgcatttaatgaattagatgaagctcgctatgtggttgggcgcatcaagcagtgg
catgaaaacggtggtgcattgcaagattgcgccattctttatcgcagtaacgcccaatcc
cgtgtgctggaagaggcgttaattcaaagtgctatggcataccggatttatggtggccaa
cggttctttgaacgccaagaaattaaggatgcattatcttatttaagattaattgctaac
cgtaacgatgatgcctctttcgagcgcgttgtgaatactccaactcgtggaattggtgag
cgtacgctagatacggttcgccaaacggcacgggaccagcagttaaccctctgggaagct
tgtgagtatttacttcgtgagcaagtcctcggcggaagagctgcaagttctattgaacgt
ttccttgaattaatcgacgccctcgctaaagaaacccaagatatgccgctgcatgttcag
gctgatcgcgtgattaaggactcaggcctgcgagcgatgtatgagcaagaaaaaggggaa
aaagcccaagcgcgtatcgaaaacttggaagagctggttaacgccacccgtgattttagt
tatcaagatgaagaccaagacttaatgccactacaggcatttttatctcacgctgcgttg
gaatctggtgaaagtcaggcggatgtgagccaagatgccgtacagctaatgacgcttcac
tcagcaaaagggctggaattccctgttgtatttatggtgggcgtggaagaaggcatgttc
ccaagccaaatgtcgatggatgaaagtggtcgccttgaagaagagcgtcgccttgcttat
gtgggaattacccgtgcgatggaaaaactgaccatcacttacgcagaaagccgccgctta
tatggtaaagaagtttaccatcgtccttcacggtttattggtgagctgccgacggagtgc
gtggaagaagttcgcttaagagccacaatttctcgtcctgttagccatcaacgtttaggt
acgccaattagccaaaatgattctggctatgcattagggcagcgagtgatgcaccctaaa
ttcggggaaggcaccattatcaatcttgaaggtagtggagagcattgtcgtctacaaatt
gcttttcaagggcaagggattaaatggctggtggcatcttatgcacggctagaaaatatc
tag
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